RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CKBP12277 381 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 HMGN5P82970 282 aaKnown RBP14.47□□□□□ -0.09
VPREB3-201ENST00000248948 PPFIA1Q13136 1202 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 FAM160B1Q5W0V3 765 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 MIS18BP1Q6P0N0 1132 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 TAF2Q6P1X5 1199 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 ZNF365Q70YC5 407 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 C16orf59Q7L2K0 433 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 NEK8Q86SG6 692 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 CCDC83Q8IWF9 413 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 PCYT2Q99447 389 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 RNPEPQ9H4A4 650 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 COL1A2P08123 1366 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 WDR64B1ANS9 1081 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 DDX39AO00148 427 aaKnown RBP14.46□□□□□ -0.09
VPREB3-201ENST00000248948 MSH4O15457 936 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 TREHO43280 583 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 TDP2O95551 362 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 ACRP10323 421 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 ACTN1P12814 892 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 MARK3P27448 753 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 STAT5BP51692 787 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 ZNF200P98182 395 aaPredicted RBP14.46□□□□□ -0.09
VPREB3-201ENST00000248948 INF2Q27J81 1249 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 PPP4R3AQ6IN85 833 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 ABHD15Q6UXT9 468 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 CCDC60Q8IWA6 550 aaPredicted RBP14.46□□□□□ -0.09
VPREB3-201ENST00000248948 SLC5A5Q92911 643 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 TNFRSF25Q93038 417 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 WNT8BQ93098 351 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 VWCEQ96DN2 955 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 GJB4Q9NTQ9 266 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 SETD4Q9NVD3 440 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 DDX25Q9UHL0 483 aaKnown RBP14.46□□□□□ -0.09
VPREB3-201ENST00000248948 TUBE1Q9UJT0 475 aa14.46□□□□□ -0.09
VPREB3-201ENST00000248948 TMEM265A0A087WTH1 108 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 MBLAC1A4D2B0 266 aaPredicted RBP14.45□□□□□ -0.1
VPREB3-201ENST00000248948 RRN3P2A6NIE6 340 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 BACH1O14867 736 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 GAS7O60861 476 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 BAIAP3O94812 1187 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 FGBP02675 491 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 CXCL10P02778 98 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 SFNP31947 248 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 MCM2P49736 904 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 JAK3P52333 1124 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 GRIK4Q16099 956 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 LRCH2Q5VUJ6 765 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 TRAF7Q6Q0C0 670 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 PIK3AP1Q6ZUJ8 805 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 RPAINQ86UA6 219 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 RDM1Q8NG50 284 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 ETNPPLQ8TBG4 499 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 OXER1Q8TDS5 423 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 TEKT3Q9BXF9 490 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 ZNF302Q9NR11 478 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 TRPC6Q9Y210 931 aa14.45□□□□□ -0.1
VPREB3-201ENST00000248948 EVPLQ92817 2033 aa14.44□□□□□ -0.1
VPREB3-201ENST00000248948 PSMD10O75832 226 aa14.44□□□□□ -0.1
VPREB3-201ENST00000248948 PSAPP07602 524 aa14.44□□□□□ -0.1
VPREB3-201ENST00000248948 THPOP40225 353 aa14.44□□□□□ -0.1
VPREB3-201ENST00000248948 PLCB4Q15147 1175 aa14.44□□□□□ -0.1
VPREB3-201ENST00000248948 LETM2Q2VYF4 491 aa14.44□□□□□ -0.1
VPREB3-201ENST00000248948 KRT40Q6A162 431 aa14.44□□□□□ -0.1
VPREB3-201ENST00000248948 FAM109BQ6ICB4 259 aaPredicted RBP14.44□□□□□ -0.1
VPREB3-201ENST00000248948 DEFB128Q7Z7B8 93 aa14.44□□□□□ -0.1
VPREB3-201ENST00000248948 DIS3L2Q8IYB7 885 aaKnown RBP14.44□□□□□ -0.1
VPREB3-201ENST00000248948 ATP8B4Q8TF62 1192 aa14.44□□□□□ -0.1
VPREB3-201ENST00000248948 PCDHA10Q9Y5I2 948 aa14.44□□□□□ -0.1
VPREB3-201ENST00000248948 COL4A6Q14031 1691 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.43□□□□□ -0.1
VPREB3-201ENST00000248948 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.43□□□□□ -0.1
VPREB3-201ENST00000248948 POTEB3A0JP26 581 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 TBX3O15119 743 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 SLC37A4O43826 429 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 HBP1O60381 514 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 DTNBO60941 627 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 NR5A1Q13285 461 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 SAFBQ15424 915 aaKnown RBP eCLIP14.43□□□□□ -0.1
VPREB3-201ENST00000248948 ZNF618Q5T7W0 954 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 PDXDC2PQ6P474 469 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 CNKSR3Q6P9H4 555 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 POTEBQ6S5H4 581 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 B3GNT9Q6UX72 402 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 OTOP2Q7RTS6 562 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 C8orf76Q96K31 380 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 FAM167AQ96KS9 214 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 KCNMB3Q9NPA1 279 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 MAFBQ9Y5Q3 323 aaPredicted RBP14.43□□□□□ -0.1
VPREB3-201ENST00000248948 GTF3C3Q9Y5Q9 886 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 CDH23Q9H251 3354 aa14.43□□□□□ -0.1
VPREB3-201ENST00000248948 RSPH10B2B2RC85 870 aa14.42□□□□□ -0.1
VPREB3-201ENST00000248948 NBNO60934 754 aa14.42□□□□□ -0.1
VPREB3-201ENST00000248948 EFCAB14O75071 495 aa14.42□□□□□ -0.1
VPREB3-201ENST00000248948 RSPH10BP0C881 870 aa14.42□□□□□ -0.1
VPREB3-201ENST00000248948 INSRRP14616 1297 aa14.42□□□□□ -0.1
VPREB3-201ENST00000248948 MBTPS1Q14703 1052 aa14.42□□□□□ -0.1
VPREB3-201ENST00000248948 GPNMBQ14956 572 aa14.42□□□□□ -0.1
VPREB3-201ENST00000248948 FAM26DQ5JW98 314 aa14.42□□□□□ -0.1
VPREB3-201ENST00000248948 MARCH8Q5T0T0 291 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms