RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SKA2Q8WVK7 121 aaPredicted RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 RNF25Q96BH1 459 aaPredicted RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 ASXL3Q9C0F0 2248 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 PDHBP11177 359 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 CHRNDQ07001 517 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 C16orf87Q6PH81 154 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 NEK8Q86SG6 692 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 CNBD1Q8NA66 436 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 TXLNGQ9NUQ3 528 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 DGKIO75912 1065 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 SLFN14P0C7P3 912 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 BTDP43251 543 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 RSBN1LQ6PCB5 846 aaPredicted RBP8.11□□□□□ -1.11
RIF1-201ENST00000243326 ARHGAP26Q9UNA1 814 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 TTC26A0AVF1 554 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 CCDC78A2IDD5 438 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 ASPHQ12797 758 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 OSBPL9Q96SU4 736 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 ANKRD2Q9GZV1 360 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 FAM196BA6NMK8 535 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 ATMINO43313 823 aaPredicted RBP8.11□□□□□ -1.11
RIF1-201ENST00000243326 NCAPHQ15003 741 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 MAN2A1Q16706 1144 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 LARP4BQ92615 738 aaKnown RBP8.11□□□□□ -1.11
RIF1-201ENST00000243326 CHUKO15111 745 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 USP14P54578 494 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 SHC4Q6S5L8 630 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 OGFOD1Q8N543 542 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 NDST4Q9H3R1 872 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 MYOM2P54296 1465 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 SPATS2Q86XZ4 545 aaKnown RBP8.11□□□□□ -1.11
RIF1-201ENST00000243326 P3H4Q92791 437 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 CELF4Q9BZC1 486 aaKnown RBP8.11□□□□□ -1.11
RIF1-201ENST00000243326 YEATS2Q9ULM3 1422 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 ARHGEF12Q9NZN5 1544 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 RASA4BC9J798 803 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 RASA4O43374 803 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 DKC1O60832 514 aaKnown RBP eCLIP8.11□□□□□ -1.11
RIF1-201ENST00000243326 GRK7Q8WTQ7 553 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 C1orf112Q9NSG2 853 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 RTCBQ9Y3I0 505 aaKnown RBP8.11□□□□□ -1.11
RIF1-201ENST00000243326 SEC16AO15027 2179 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 WDR46O15213 610 aaKnown RBP8.11□□□□□ -1.11
RIF1-201ENST00000243326 CREB3O43889 395 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 NEK9Q8TD19 979 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 HOOK2Q96ED9 719 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 NUDCD1Q96RS6 583 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 NBPF3Q9H094 633 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 NPHS2Q9NP85 383 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 EIF4G3O43432 1585 aaKnown RBP8.11□□□□□ -1.11
RIF1-201ENST00000243326 KCTD17Q8N5Z5 321 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 PANX2Q96RD6 677 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 SYNDIG1LA6NDD5 238 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 GYG2O15488 501 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 LGR5O75473 907 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
RIF1-201ENST00000243326 NBPF9Q3BBW0 867 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 KDELC2Q7Z4H8 507 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 CCDC33Q8N5R6 958 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 TTC30BQ8N4P2 665 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 EXOC7Q9UPT5 735 aa8.11□□□□□ -1.11
RIF1-201ENST00000243326 POTEMA6NI47 508 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 PLA2G4AP47712 749 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 CPA2P48052 419 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ARHGEF16Q5VV41 709 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 GALNT4Q8N4A0 578 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 SYT2Q8N9I0 419 aaPredicted RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 SLC13A1Q9BZW2 595 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 NYXQ9GZU5 481 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ZFP69BQ9UJL9 534 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 SSH2Q76I76 1423 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 GNGT2O14610 69 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 GIPC1O14908 333 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 PPP6R2O75170 966 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 SERPING1P05155 500 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 LONP1P36776 959 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 NECTIN1Q15223 517 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ST13P4Q8IZP2 240 aaPredicted RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 SMAD5Q99717 465 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 ACTR5Q9H9F9 607 aaPredicted RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 ARHGEF10LQ9HCE6 1279 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 SEPT9Q9UHD8 586 aaPredicted RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 PARP3Q9Y6F1 533 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 C1orf228Q6PIY5 440 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 AFAP1L2Q8N4X5 818 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 TRIML2Q8N7C3 387 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 SLC26A7Q8TE54 656 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ATG3Q9NT62 314 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 PCSK1NQ9UHG2 260 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 RPS6P62753 249 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 STOX1Q6ZVD7 989 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 CAPN11Q9UMQ6 739 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 NOC2LQ9Y3T9 749 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 SRPRBQ9Y5M8 271 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 SETSIPP0DME0 302 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 PPP2R2AP63151 447 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ETNK1Q9HBU6 452 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 SENP2Q9HC62 589 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 HNRNPCP07910 306 aaKnown RBP eCLIP8.1□□□□□ -1.115e-6■■■□□ 16.4
RIF1-201ENST00000243326 LMNB1P20700 586 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms