RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 CIAO1O76071 339 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 ABL1P00519 1130 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 GSPT1P15170 499 aaKnown RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 ZFXP17010 805 aaPredicted RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 TMPRSS15P98073 1019 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 RNF207Q6ZRF8 634 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 PARD3BQ8TEW8 1205 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 ADCY1Q08828 1119 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 ACAD11Q709F0 780 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 ANKRD13CQ8N6S4 541 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 PARD6BQ9BYG5 372 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 LSG1Q9H089 658 aaKnown RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 TMCC1O94876 653 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 PABPC4Q13310 644 aaKnown RBP eCLIP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 DYDC2Q96IM9 177 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 BTBD6Q96KE9 485 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 KLC2Q9H0B6 622 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 TMEM206Q9H813 350 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 WARS2Q9UGM6 360 aaKnown RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 NFU1Q9UMS0 254 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 TSPOAP1O95153 1857 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 TMEM232C9JQI7 657 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 SEMA3EO15041 775 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 KIF1CO43896 1103 aaKnown RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 ALDH1B1P30837 517 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 TMCO5AQ8N6Q1 288 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 PCDHA13Q9Y5I0 950 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 MIF4GDA9UHW6 222 aaKnown RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 CFLARO15519 480 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 GFPT2O94808 682 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 KRT4P19013 534 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 NEK2P51955 445 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 GYG2O15488 501 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 MFAP3LO75121 409 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 CXCR5P32302 372 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 DDIT3P35638 169 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 RPS8P62241 208 aaKnown RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 ANGPTL8Q6UXH0 198 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 RHOT2Q8IXI1 618 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 SYT2Q8N9I0 419 aaPredicted RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 DTNBP1Q96EV8 351 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 UBN1Q9NPG3 1134 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 WDR17Q8IZU2 1322 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 PAMP19021 973 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 IFNA8P32881 189 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 ADD1P35611 737 aaKnown RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 HDAC4P56524 1084 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 MAP3K10Q02779 954 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 TRIM60Q495X7 471 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 KIF9Q9HAQ2 790 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 STK32BQ9NY57 414 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 APOBEC2Q9Y235 224 aaKnown RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 NCF2P19878 526 aaPredicted RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 DYNLT1P63172 113 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 MRPS25P82663 173 aaKnown RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 PITPNM3Q9BZ71 974 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 ADGRL2O95490 1459 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 TCHHQ07283 1943 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 FGAP02671 866 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 SERPINB2P05120 415 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 NPR1P16066 1061 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 UBE3CQ15386 1083 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 WDR11Q9BZH6 1224 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 NBPF3Q9H094 633 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 CCNYQ8ND76 341 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 GFM2Q969S9 779 aaKnown RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 DACH2Q96NX9 599 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 PPARGC1AQ9UBK2 798 aaKnown RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 SEPT9Q9UHD8 586 aaPredicted RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 TTLL1O95922 423 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 SLC4A1P02730 911 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 BRD2P25440 801 aaKnown RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 CERKLQ49MI3 558 aaPredicted RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 TRIML2Q8N7C3 387 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 CDHR1Q96JP9 859 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 BEGAINQ9BUH8 593 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 MOCS3O95396 460 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 RWDD2BP57060 319 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 NACC1Q96RE7 527 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 POLR1AO95602 1720 aaPredicted RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 MYH9P35579 1960 aaKnown RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 PPP1R12AO14974 1030 aaPredicted RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 CYP4A11Q02928 519 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 ABCB5Q2M3G0 1257 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 HP1BP3Q5SSJ5 553 aaPredicted RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 CATSPER1Q8NEC5 780 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 SCG3Q8WXD2 468 aaKnown RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 ZNF212Q9UDV6 495 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 FTCDO95954 541 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 IGBP1P78318 339 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 TFAMQ00059 246 aaKnown RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 USP44Q9H0E7 712 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 SPTLC3Q9NUV7 552 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 E2F6O75461 281 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 ARHGDIAP52565 204 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 KRT31Q15323 416 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 ARL6IP4Q66PJ3 421 aaKnown RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 LRRC47Q8N1G4 583 aaKnown RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 ARHGAP18Q8N392 663 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 PGBD1Q96JS3 809 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms