RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 KNOP1Q1ED39 458 aaKnown RBP25.72■■□□□ 1.71
MSX2-201ENST00000239243 BMT2Q1RMZ1 405 aa25.72■■□□□ 1.71
MSX2-201ENST00000239243 ZFP91Q96JP5 570 aaPredicted RBP25.72■■□□□ 1.71
MSX2-201ENST00000239243 MAF1Q9H063 256 aa25.72■■□□□ 1.71
MSX2-201ENST00000239243 L2HGDHQ9H9P8 463 aa25.72■■□□□ 1.71
MSX2-201ENST00000239243 AGO4Q9HCK5 861 aaKnown RBP25.72■■□□□ 1.71
MSX2-201ENST00000239243 ADAMTS5Q9UNA0 930 aa25.72■■□□□ 1.71
MSX2-201ENST00000239243 TRAF3IP3Q9Y228 551 aa25.72■■□□□ 1.71
MSX2-201ENST00000239243 MIER3Q7Z3K6 550 aa25.71■■□□□ 1.71
MSX2-201ENST00000239243 TAAR1Q96RJ0 339 aa25.71■■□□□ 1.71
MSX2-201ENST00000239243 RMDN3Q96TC7 470 aa25.71■■□□□ 1.71
MSX2-201ENST00000239243 LXNQ9BS40 222 aa25.71■■□□□ 1.71
MSX2-201ENST00000239243 MRPL44Q9H9J2 332 aaKnown RBP25.71■■□□□ 1.71
MSX2-201ENST00000239243 SEL1LQ9UBV2 794 aa25.71■■□□□ 1.71
MSX2-201ENST00000239243 CETN3O15182 167 aa25.71■■□□□ 1.71
MSX2-201ENST00000239243 FAM13AO94988 1023 aa25.71■■□□□ 1.71
MSX2-201ENST00000239243 MRPS9P82933 396 aaKnown RBP25.71■■□□□ 1.71
MSX2-201ENST00000239243 SLC30A10Q6XR72 485 aa25.71■■□□□ 1.71
MSX2-201ENST00000239243 C1orf186Q6ZWK4 172 aa25.71■■□□□ 1.71
MSX2-201ENST00000239243 ADARB2Q9NS39 739 aaKnown RBP25.71■■□□□ 1.71
MSX2-201ENST00000239243 ODF2LQ9ULJ1 636 aa25.71■■□□□ 1.71
MSX2-201ENST00000239243 MYPNQ86TC9 1320 aa25.7■■□□□ 1.7
MSX2-201ENST00000239243 PDXKO00764 312 aa25.7■■□□□ 1.7
MSX2-201ENST00000239243 CALUO43852 315 aaPredicted RBP25.7■■□□□ 1.7
MSX2-201ENST00000239243 EIF2AK2P19525 551 aaKnown RBP25.7■■□□□ 1.7
MSX2-201ENST00000239243 MEA1Q16626 185 aa25.7■■□□□ 1.7
MSX2-201ENST00000239243 NSMFQ6X4W1 530 aa25.7■■□□□ 1.7
MSX2-201ENST00000239243 REPS2Q8NFH8 660 aa25.7■■□□□ 1.7
MSX2-201ENST00000239243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.7■■□□□ 1.7
MSX2-201ENST00000239243 RBM46Q8TBY0 533 aaKnown RBP25.7■■□□□ 1.7
MSX2-201ENST00000239243 PXMP2Q9NR77 195 aa25.7■■□□□ 1.7
MSX2-201ENST00000239243 SIK3Q9Y2K2 1263 aa25.7■■□□□ 1.7
MSX2-201ENST00000239243 RLFQ13129 1914 aa25.7■■□□□ 1.7
MSX2-201ENST00000239243 ATP2A1O14983 1001 aa25.69■■□□□ 1.7
MSX2-201ENST00000239243 GNG11P61952 73 aa25.69■■□□□ 1.7
MSX2-201ENST00000239243 ADAM9Q13443 819 aa25.69■■□□□ 1.7
MSX2-201ENST00000239243 ARHGEF16Q5VV41 709 aa25.69■■□□□ 1.7
MSX2-201ENST00000239243 PDCD2LQ9BRP1 358 aa25.69■■□□□ 1.7
MSX2-201ENST00000239243 FAM184BQ9ULE4 1060 aa25.69■■□□□ 1.7
MSX2-201ENST00000239243 EIF3DO15371 548 aaKnown RBP eCLIP25.69■■□□□ 1.7
MSX2-201ENST00000239243 P4HBP07237 508 aaKnown RBP25.69■■□□□ 1.7
MSX2-201ENST00000239243 CATSPERGQ6ZRH7 1159 aa25.69■■□□□ 1.7
MSX2-201ENST00000239243 PARVGQ9HBI0 331 aa25.69■■□□□ 1.7
MSX2-201ENST00000239243 FZD1Q9UP38 647 aa25.69■■□□□ 1.7
MSX2-201ENST00000239243 AFG3L2Q9Y4W6 797 aa25.69■■□□□ 1.7
MSX2-201ENST00000239243 RASSF10A6NK89 507 aa25.68■■□□□ 1.7
MSX2-201ENST00000239243 RSPH10B2B2RC85 870 aa25.68■■□□□ 1.7
MSX2-201ENST00000239243 DHX15O43143 795 aaKnown RBP25.68■■□□□ 1.7
MSX2-201ENST00000239243 RSPH10BP0C881 870 aa25.68■■□□□ 1.7
MSX2-201ENST00000239243 CASP5P51878 434 aa25.68■■□□□ 1.7
MSX2-201ENST00000239243 SNRNP48Q6IEG0 339 aaKnown RBP25.68■■□□□ 1.7
MSX2-201ENST00000239243 ZSWIM4Q9H7M6 989 aa25.68■■□□□ 1.7
MSX2-201ENST00000239243 EPN1Q9Y6I3 576 aaPredicted RBP25.68■■□□□ 1.7
MSX2-201ENST00000239243 SLU7O95391 586 aaKnown RBP25.68■■□□□ 1.7
MSX2-201ENST00000239243 KLK7P49862 253 aa25.68■■□□□ 1.7
MSX2-201ENST00000239243 STXBP4Q6ZWJ1 553 aa25.68■■□□□ 1.7
MSX2-201ENST00000239243 EDEM3Q9BZQ6 932 aa25.68■■□□□ 1.7
MSX2-201ENST00000239243 AGPAT5Q9NUQ2 364 aa25.68■■□□□ 1.7
MSX2-201ENST00000239243 TYW1Q9NV66 732 aaKnown RBP25.68■■□□□ 1.7
MSX2-201ENST00000239243 HOXC10Q9NYD6 342 aa25.68■■□□□ 1.7
MSX2-201ENST00000239243 COL11A1P12107 1806 aaPredicted RBP25.67■■□□□ 1.7
MSX2-201ENST00000239243 DDX39AO00148 427 aaKnown RBP25.67■■□□□ 1.7
MSX2-201ENST00000239243 NKRFO15226 690 aaKnown RBP eCLIP25.67■■□□□ 1.7
MSX2-201ENST00000239243 GCNT3O95395 438 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 NR2F2P24468 414 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 CASQ1P31415 396 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 CDK17Q00537 523 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 SH3D19Q5HYK7 790 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 TRIM59Q8IWR1 403 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 WNK4Q96J92 1243 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 TEX13BQ9BXU2 312 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 FHDC1Q9C0D6 1143 aaPredicted RBP25.67■■□□□ 1.7
MSX2-201ENST00000239243 TCEAL9Q9UHQ7 104 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 ZNF214Q9UL59 606 aaPredicted RBP25.67■■□□□ 1.7
MSX2-201ENST00000239243 UBE4BO95155 1302 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 ARHGEF35A5YM69 484 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 KIF5CO60282 957 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 NDUFA10O95299 355 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 GUCY2CP25092 1073 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 RPL13P26373 211 aaKnown RBP25.67■■□□□ 1.7
MSX2-201ENST00000239243 ARHGAP29Q52LW3 1261 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 MYCT1Q8N699 235 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 ERO1AQ96HE7 468 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 CHP1Q99653 195 aa25.67■■□□□ 1.7
MSX2-201ENST00000239243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.67■■□□□ 1.7
MSX2-201ENST00000239243 USP2O75604 605 aaPredicted RBP25.66■■□□□ 1.7
MSX2-201ENST00000239243 DDNO94850 711 aaPredicted RBP25.66■■□□□ 1.7
MSX2-201ENST00000239243 MYBP10242 640 aa25.66■■□□□ 1.7
MSX2-201ENST00000239243 MYCLP12524 364 aaPredicted RBP25.66■■□□□ 1.7
MSX2-201ENST00000239243 CCND2P30279 289 aa25.66■■□□□ 1.7
MSX2-201ENST00000239243 CYLC1P35663 651 aaPredicted RBP25.66■■□□□ 1.7
MSX2-201ENST00000239243 ZNF131P52739 623 aa25.66■■□□□ 1.7
MSX2-201ENST00000239243 PPP2R3AQ06190 1150 aa25.66■■□□□ 1.7
MSX2-201ENST00000239243 ITGB3BPQ13352 177 aaPredicted RBP25.66■■□□□ 1.7
MSX2-201ENST00000239243 BAATQ14032 418 aaPredicted RBP25.66■■□□□ 1.7
MSX2-201ENST00000239243 WDR59Q6PJI9 974 aa25.66■■□□□ 1.7
MSX2-201ENST00000239243 MTERF4Q7Z6M4 381 aaKnown RBP25.66■■□□□ 1.7
MSX2-201ENST00000239243 CCDC170Q8IYT3 715 aa25.66■■□□□ 1.7
MSX2-201ENST00000239243 BANK1Q8NDB2 785 aa25.66■■□□□ 1.7
MSX2-201ENST00000239243 DCPSQ96C86 337 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms