RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CHST13Q8NET6 341 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 SNX29Q8TEQ0 813 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 CLEC4DQ8WXI8 215 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 LENG9Q96B70 501 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 RIT2Q99578 217 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-201ENST00000238688 NRBP1Q9UHY1 535 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 IGLV3-22A0A075B6J6 115 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 MEIS1O00470 390 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 CBFA2T2O43439 604 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 RHOBTB3O94955 611 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 RPN1P04843 607 aaKnown RBP14.74□□□□□ -0.05
SLIRP-201ENST00000238688 RPA1P27694 616 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 MAGEA10P43363 369 aaPredicted RBP14.74□□□□□ -0.05
SLIRP-201ENST00000238688 PSMD2Q13200 908 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 PPP2R5CQ13362 524 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 LRRC41Q15345 812 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 PRR16Q569H4 304 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 MAMDC4Q6UXC1 1216 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 PLA2G4DQ86XP0 818 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 AOPEPQ8N6M6 819 aa14.74□□□□□ -0.05
SLIRP-201ENST00000238688 LARP4BQ92615 738 aaKnown RBP14.74□□□□□ -0.05
SLIRP-201ENST00000238688 MMTAG2Q9BU76 263 aaKnown RBP14.74□□□□□ -0.05
SLIRP-201ENST00000238688 POLR3CQ9BUI4 534 aaPredicted RBP14.74□□□□□ -0.05
SLIRP-201ENST00000238688 LRRC37A2A6NM11 1700 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 LOC102724159A0A0B4J2E5 919 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 ALAS1P13196 640 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 HOXA13P31271 388 aaPredicted RBP14.73□□□□□ -0.05
SLIRP-201ENST00000238688 AFMP43652 599 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 ATN1P54259 1190 aaPredicted RBP14.73□□□□□ -0.05
SLIRP-201ENST00000238688 SNX17Q15036 470 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 PWP2Q15269 919 aaKnown RBP14.73□□□□□ -0.05
SLIRP-201ENST00000238688 ARRDC4Q8NCT1 418 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 RAD54LQ92698 747 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 SLC5A5Q92911 643 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 LENG1Q96BZ8 264 aaPredicted RBP14.73□□□□□ -0.05
SLIRP-201ENST00000238688 CDHR1Q96JP9 859 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 AGBL1Q96MI9 1066 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 TRERF1Q96PN7 1200 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 TRIM9Q9C026 710 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 TRIM5Q9C035 493 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 ACAD9Q9H845 621 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 TUFT1Q9NNX1 390 aa14.73□□□□□ -0.05
SLIRP-201ENST00000238688 B4DLN1 442 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 FAM86B1E9PN63 330 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 BIN1O00499 593 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 ADCY6O43306 1168 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 FAM86B2P0C5J1 330 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 PRR29P0C7W0 189 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 SNAP25P60880 206 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 SPAG1Q07617 926 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 SPIRE1Q08AE8 756 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 GRB10Q13322 594 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 NCAPHQ15003 741 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 SLC39A5Q6ZMH5 540 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 RNF207Q6ZRF8 634 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 ZNF467Q7Z7K2 595 aaPredicted RBP14.72□□□□□ -0.05
SLIRP-201ENST00000238688 FCHSD1Q86WN1 690 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 MSL3Q8N5Y2 521 aaKnown RBP14.72□□□□□ -0.05
SLIRP-201ENST00000238688 RDM1Q8NG50 284 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 CTAGE1Q96RT6 745 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 MXRA8Q9BRK3 442 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 KATNBL1Q9H079 304 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 RNF146Q9NTX7 359 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 KCND2Q9NZV8 630 aa14.72□□□□□ -0.05
SLIRP-201ENST00000238688 ASTN1O14525 1302 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 SYNGAP1Q96PV0 1343 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 POTEMA6NI47 508 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 MSH4O15457 936 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 ADAMTS4O75173 837 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 KIF20AO95235 890 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 PGK1P00558 417 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 CCT6AP40227 531 aaKnown RBP14.71□□□□□ -0.05
SLIRP-201ENST00000238688 ADCYAP1R1P41586 468 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 ZNF75DP51815 510 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 RTP1P59025 263 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 CNTN2Q02246 1040 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 CUL4BQ13620 913 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 SPATA1Q5VX52 437 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 UNC13DQ70J99 1090 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 FAM133AQ8N9E0 248 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 GIMAP8Q8ND71 665 aaPredicted RBP14.71□□□□□ -0.05
SLIRP-201ENST00000238688 DNERQ8NFT8 737 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 SYTL5Q8TDW5 730 aaPredicted RBP14.71□□□□□ -0.05
SLIRP-201ENST00000238688 NOC3LQ8WTT2 800 aaKnown RBP14.71□□□□□ -0.05
SLIRP-201ENST00000238688 DHTKD1Q96HY7 919 aaPredicted RBP14.71□□□□□ -0.05
SLIRP-201ENST00000238688 LRCH3Q96II8 777 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 IWS1Q96ST2 819 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 MTRQ99707 1265 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 TBC1D22BQ9NU19 505 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 IMPACTQ9P2X3 320 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 RWDD2AQ9UIY3 292 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 VAV3Q9UKW4 847 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 PHF24Q9UPV7 400 aa14.71□□□□□ -0.05
SLIRP-201ENST00000238688 BICDL2A1A5D9 508 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 PP2D1A8MPX8 630 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 NFIBO00712 420 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 PSMA7O14818 248 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 PSMD10O75832 226 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 PTMAP06454 111 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms