RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 ATAD5Q96QE3 1844 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 CEP350Q5VT06 3117 aa17.08■□□□□ 0.32
CTSD-201ENST00000236671 PLA2G4BP0C869 781 aa17.08■□□□□ 0.32
CTSD-201ENST00000236671 DNAJC21Q5F1R6 531 aaKnown RBP17.08■□□□□ 0.32
CTSD-201ENST00000236671 CC2D2BQ6DHV5 1058 aa17.08■□□□□ 0.32
CTSD-201ENST00000236671 CCDC65Q8IXS2 484 aa17.08■□□□□ 0.32
CTSD-201ENST00000236671 ARL8AQ96BM9 186 aa17.08■□□□□ 0.32
CTSD-201ENST00000236671 GANQ9H2C0 597 aa17.08■□□□□ 0.32
CTSD-201ENST00000236671 KIAA1024Q9UPX6 916 aa17.08■□□□□ 0.32
CTSD-201ENST00000236671 A0A087X0T9 212 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 NPHP3-ACAD11A0A0J9YXS1 232 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 GRIN3BO60391 1043 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 RAD17O75943 681 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 FTCDO95954 541 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 FAM228BP0C875 321 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 MRPL12P52815 198 aaKnown RBP17.07■□□□□ 0.32
CTSD-201ENST00000236671 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
CTSD-201ENST00000236671 RAPGEF1Q13905 1077 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 MEI1Q5TIA1 1274 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 IFT20Q8IY31 132 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 INPP4AQ96PE3 977 aaPredicted RBP17.07■□□□□ 0.32
CTSD-201ENST00000236671 CAPS2Q9BXY5 557 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 EHD4Q9H223 541 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 DDX4Q9NQI0 724 aaKnown RBP17.07■□□□□ 0.32
CTSD-201ENST00000236671 AIPL1Q9NZN9 384 aa17.07■□□□□ 0.32
CTSD-201ENST00000236671 ZNF646O15015 1829 aaPredicted RBP17.06■□□□□ 0.32
CTSD-201ENST00000236671 POTEB3A0JP26 581 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 GRID2IPA4D2P6 1211 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 POTECB2RU33 542 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 ANKRD65E5RJM6 399 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 ZBTB5O15062 677 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 MARCH6O60337 910 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 ECE2O60344 883 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 HSF2BPO75031 334 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 LMNB1P20700 586 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 POTEBQ6S5H4 581 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 GPBP1Q86WP2 473 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 ZIM3Q96PE6 472 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 PACSIN1Q9BY11 444 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 PSTPIP2Q9H939 334 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 FRMD3A2A2Y4 597 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 ZSCAN5CA6NGD5 496 aaPredicted RBP17.06■□□□□ 0.32
CTSD-201ENST00000236671 USP17L10C9JJH3 530 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 EIF3HO15372 352 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTSD-201ENST00000236671 HEXIM1O94992 359 aaKnown RBP17.06■□□□□ 0.32
CTSD-201ENST00000236671 CYP11B2P19099 503 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 SLC16A2P36021 539 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 CARSP49589 748 aaKnown RBP17.06■□□□□ 0.32
CTSD-201ENST00000236671 FAM133AQ8N9E0 248 aa17.06■□□□□ 0.32
CTSD-201ENST00000236671 FAM153BP0C7A2 387 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 DNA2P51530 1060 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 SKOR1P84550 965 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 FAM153CQ494X1 144 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 HERC4Q5GLZ8 1057 aaPredicted RBP17.05■□□□□ 0.32
CTSD-201ENST00000236671 RUFY1Q96T51 708 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 KCNMB3Q9NPA1 279 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 EMILIN3Q9NT22 766 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 FAM153AQ9UHL3 310 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 NFU1Q9UMS0 254 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 MYO3BQ8WXR4 1341 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 LTBP3Q9NS15 1303 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 ESYT3A0FGR9 886 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 SHMT1P34896 483 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 GUCY2DQ02846 1103 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 ARID5AQ03989 594 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 KLHL30Q0D2K2 578 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 PAK2Q13177 524 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 ASIC2Q16515 512 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 KIAA0753Q2KHM9 967 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 EDRF1Q3B7T1 1238 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 GPATCH4Q5T3I0 446 aaKnown RBP17.05■□□□□ 0.32
CTSD-201ENST00000236671 KCTD1Q719H9 257 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 UIMC1Q96RL1 719 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 NAP1L4Q99733 375 aaKnown RBP17.05■□□□□ 0.32
CTSD-201ENST00000236671 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.05■□□□□ 0.32
CTSD-201ENST00000236671 EPB41L5Q9HCM4 733 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 SWAP70Q9UH65 585 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 ADAMTS1Q9UHI8 967 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 SERPINB13Q9UIV8 391 aa17.05■□□□□ 0.32
CTSD-201ENST00000236671 PACSIN2Q9UNF0 486 aaPredicted RBP17.05■□□□□ 0.32
CTSD-201ENST00000236671 GREB1LQ9C091 1923 aaPredicted RBP17.04■□□□□ 0.32
CTSD-201ENST00000236671 SLC26A4O43511 780 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 CLSTN1O94985 981 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 SLC12A3P55017 1021 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 GNGT1P63211 74 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 ADAM9Q13443 819 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 ARSHQ5FYA8 562 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 DPY19L2P1Q6NXN4 242 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 IQCKQ8N0W5 287 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 MREGQ8N565 214 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 ZNF526Q8TF50 670 aaPredicted RBP17.04■□□□□ 0.32
CTSD-201ENST00000236671 KRT12Q99456 494 aa17.04■□□□□ 0.32
CTSD-201ENST00000236671 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
CTSD-201ENST00000236671 SHTN1A0MZ66 631 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 MED24O75448 989 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 CCT5P48643 541 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 GTF2IP78347 998 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 KCNH2Q12809 1159 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms