RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 IFI16Q16666 785 aaKnown RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 TMEM266Q2M3C6 531 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 SMIM5Q71RC9 77 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 REXO1Q8N1G1 1221 aaKnown RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 RASGEF1CQ8N431 466 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 METTL13Q8N6R0 699 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 MAGOHBQ96A72 148 aaKnown RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 DDX47Q9H0S4 455 aaKnown RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 SLITRK6Q9H5Y7 841 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 STX8Q9UNK0 236 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 COL14A1Q05707 1796 aaKnown RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 POTEMA6NI47 508 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 SLC37A4O43826 429 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 EDIL3O43854 480 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 MGRN1O60291 552 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 PTK2Q05397 1052 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 IRF2BP2Q7Z5L9 587 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 SNX29Q8TEQ0 813 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 TLCD1Q96CP7 247 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 GOLPH3Q9H4A6 298 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 BIN2Q9UBW5 565 aaPredicted RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 F8VZ95 297 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 DAPK3O43293 454 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 FAM26FQ5R3K3 315 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 SOGA3Q5TF21 947 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 ZC3H3Q8IXZ2 948 aaKnown RBP15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 CENPTQ96BT3 561 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 RAB34Q9BZG1 259 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 CNOT10Q9H9A5 744 aaKnown RBP15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 F8W031 263 aaPredicted RBP15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 BACH1O14867 736 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 PPARDQ03181 441 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 KRT79Q5XKE5 535 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 DPY19L2P1Q6NXN4 242 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 CLEC4GQ6UXB4 293 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 ZNF571Q7Z3V5 609 aaPredicted RBP15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 CEP57Q86XR8 500 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 SH3RF3Q8TEJ3 882 aaPredicted RBP15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 MIEF2Q96C03 454 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 HVCN1Q96D96 273 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 TMEM260Q9NX78 707 aa15.29■□□□□ 0.04
SCNN1A-201ENST00000228916 ATP8B3O60423 1300 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 RPS8P62241 208 aaKnown RBP15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 ENOX2Q16206 610 aaKnown RBP15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 ERMARDQ5T6L9 678 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 SLFN11Q7Z7L1 901 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 DZIP1Q86YF9 867 aaKnown RBP15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 ZNF444Q8N0Y2 327 aaPredicted RBP15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 TPCN2Q8NHX9 752 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 PSMD1Q99460 953 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 AMACRQ9UHK6 382 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 ROBO1Q9Y6N7 1651 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 PHF20L1A8MW92 1017 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 KRIT1O00522 736 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 SSBP05455 408 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 EZRP15311 586 aaKnown RBP15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 SMARCA1P28370 1054 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 SLC8A1P32418 973 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 KRT71Q3SY84 523 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 SPDYCQ5MJ68 293 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 PROCA1Q8NCQ7 364 aaPredicted RBP15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 FGFBP2Q9BYJ0 223 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 TXLNGYQ9BZA5 131 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 KANSL2Q9H9L4 492 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 NAGPAQ9UK23 515 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 NENFQ9UMX5 172 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 STXBP5LQ9Y2K9 1186 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 PPIP5K2O43314 1243 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 TDP2O95551 362 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 ECM1Q16610 540 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 NBPF9Q3BBW0 867 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 TLDC1Q6P9B6 456 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 CPLX4Q7Z7G2 160 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 SLC51AQ86UW1 340 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 ATP6V0A4Q9HBG4 840 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 PANK4Q9NVE7 773 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 PCDHA2Q9Y5H9 948 aa15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 BZW2Q9Y6E2 419 aaKnown RBP15.28■□□□□ 0.04
SCNN1A-201ENST00000228916 ITGA4P13612 1032 aa15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 GCFC2P16383 781 aaKnown RBP15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 RASA1P20936 1047 aa15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 CCDC24Q8N4L8 307 aa15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 MARCH10Q8NA82 808 aaPredicted RBP15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 CHMP6Q96FZ7 201 aa15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 SCLT1Q96NL6 688 aa15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 XPO6Q96QU8 1125 aaKnown RBP15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 LRRC4CQ9HCJ2 640 aa15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 FAM114A2Q9NRY5 505 aa15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 SEC63Q9UGP8 760 aaKnown RBP15.27■□□□□ 0.04
SCNN1A-201ENST00000228916 PPFIA2O75334 1257 aa15.27■□□□□ 0.03
SCNN1A-201ENST00000228916 EIF3BP55884 814 aaKnown RBP15.27■□□□□ 0.03
SCNN1A-201ENST00000228916 KCNQ4P56696 695 aa15.27■□□□□ 0.03
SCNN1A-201ENST00000228916 POU5F1Q01860 360 aaKnown RBP15.27■□□□□ 0.03
SCNN1A-201ENST00000228916 DHX9Q08211 1270 aaKnown RBP15.27■□□□□ 0.03
SCNN1A-201ENST00000228916 DDB1Q16531 1140 aa15.27■□□□□ 0.03
SCNN1A-201ENST00000228916 TBC1D9BQ66K14 1250 aa15.27■□□□□ 0.03
SCNN1A-201ENST00000228916 CCDC26Q8TAB7 109 aa15.27■□□□□ 0.03
SCNN1A-201ENST00000228916 FAM129AQ9BZQ8 928 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms