RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SLFN12Q8IYM2 578 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 GLT8D2Q9H1C3 349 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 ARHGEF10LQ9HCE6 1279 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 DNAJC12Q9UKB3 198 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 SLC9A1P19634 815 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 HSPA1LP34931 641 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 CASP7P55210 303 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 ASPRV1Q53RT3 343 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 SGO2Q562F6 1265 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 ANKRD20A3Q5VUR7 823 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 NLRP14Q86W24 1093 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 CELF4Q9BZC1 486 aaKnown RBP14.92□□□□□ -0.02
NFKB1-201ENST00000226574 ZMYND12Q9H0C1 365 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 BZW2Q9Y6E2 419 aaKnown RBP14.92□□□□□ -0.02
NFKB1-201ENST00000226574 KIAA1210Q9ULL0 1709 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 PNPLA7Q6ZV29 1317 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 CDHR2Q9BYE9 1310 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 H0Y3Z8 333 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 CCDC93Q567U6 631 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 PPFIBP2Q8ND30 876 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 RNF14Q9UBS8 474 aa14.92□□□□□ -0.02
NFKB1-201ENST00000226574 SALL1Q9NSC2 1324 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 HMGB1P1B2RPK0 211 aaPredicted RBP14.91□□□□□ -0.02
NFKB1-201ENST00000226574 GCLMP48507 274 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 BANK1Q8NDB2 785 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 TRIM51Q9BSJ1 452 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 ANO3Q9BYT9 981 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 FAM114A2Q9NRY5 505 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 RGL1Q9NZL6 768 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 SHPRHQ149N8 1683 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 TTI1O43156 1089 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 PPP1R37O75864 691 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 ZRANB2O95218 330 aaKnown RBP eCLIP14.91□□□□□ -0.02
NFKB1-201ENST00000226574 GUF1Q8N442 669 aaKnown RBP14.91□□□□□ -0.02
NFKB1-201ENST00000226574 CCT8L2Q96SF2 557 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 CEP72Q9P209 647 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 PXDNQ92626 1479 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 GPATCH4Q5T3I0 446 aaKnown RBP14.91□□□□□ -0.02
NFKB1-201ENST00000226574 POMGNT1Q8WZA1 660 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 RAD54LQ92698 747 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 HAUS1Q96CS2 278 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 TMEM51Q9NW97 253 aa14.91□□□□□ -0.02
NFKB1-201ENST00000226574 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.91□□□□□ -0.02
NFKB1-201ENST00000226574 CNTNAP5Q8WYK1 1306 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.9□□□□□ -0.02
NFKB1-201ENST00000226574 GMNCA6NCL1 334 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 LMNB1P20700 586 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 DYNLT1P63172 113 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 LIN9Q5TKA1 542 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 TMED8Q6PL24 325 aaPredicted RBP14.9□□□□□ -0.02
NFKB1-201ENST00000226574 SUN1O94901 812 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 RHOBTB3O94955 611 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 MTM1Q13496 603 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 CDC37Q16543 378 aaPredicted RBP14.9□□□□□ -0.02
NFKB1-201ENST00000226574 PDXDC1Q6P996 788 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 GIMAP8Q8ND71 665 aaPredicted RBP14.9□□□□□ -0.02
NFKB1-201ENST00000226574 PBKQ96KB5 322 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 MAK16Q9BXY0 300 aaKnown RBP14.9□□□□□ -0.02
NFKB1-201ENST00000226574 SH2D4AQ9H788 454 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 SLC24A3Q9HC58 644 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 FAM205AQ6ZU69 1335 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 PASKQ96RG2 1323 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 TXNDC9O14530 226 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 ATF2P15336 505 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 SSTR3P32745 418 aaPredicted RBP14.9□□□□□ -0.02
NFKB1-201ENST00000226574 TMED2Q15363 201 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 ABCB5Q2M3G0 1257 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 C12orf60Q5U649 245 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 ATP6V1G3Q96LB4 118 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 CCSER1Q9C0I3 900 aa14.9□□□□□ -0.02
NFKB1-201ENST00000226574 TAF1DQ9H5J8 278 aaPredicted RBP14.9□□□□□ -0.02
NFKB1-201ENST00000226574 NOC2LQ9Y3T9 749 aaKnown RBP14.9□□□□□ -0.02
NFKB1-201ENST00000226574 PSMD14O00487 310 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 RAD51CO43502 376 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 AKR1B1P15121 316 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 FYB2Q5VWT5 728 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 SPATS2Q86XZ4 545 aaKnown RBP14.89□□□□□ -0.03
NFKB1-201ENST00000226574 MDM1Q8TC05 714 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 KCNV2Q8TDN2 545 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 RILPQ96NA2 401 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.89□□□□□ -0.03
NFKB1-201ENST00000226574 NR3C1P04150 777 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 HERVK_113P62684 666 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 EVX2Q03828 476 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 CASC4Q6P4E1 433 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 RNPC3Q96LT9 517 aaKnown RBP14.89□□□□□ -0.03
NFKB1-201ENST00000226574 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.89□□□□□ -0.03
NFKB1-201ENST00000226574 ABCA9Q8IUA7 1624 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 ZNF335Q9H4Z2 1342 aaPredicted RBP14.89□□□□□ -0.03
NFKB1-201ENST00000226574 A0A087X0T9 212 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 PNMA6FA0A0J9YX94 578 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 RNF225M0QZC1 329 aaPredicted RBP14.89□□□□□ -0.03
NFKB1-201ENST00000226574 EIF3HO15372 352 aaKnown RBP eCLIP14.89□□□□□ -0.03
NFKB1-201ENST00000226574 BAG2O95816 211 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 FAM228BP0C875 321 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 POLR2MP0CAP2 368 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 LSP1P33241 339 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 PDE6CP51160 858 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 KCNB1Q14721 858 aa14.89□□□□□ -0.03
NFKB1-201ENST00000226574 GRM4Q14833 912 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms