RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 RAVER2Q9HCJ3 691 aaKnown RBP6.59□□□□□ -1.35
AFP-201ENST00000226359 HOMER2Q9NSB8 354 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 RNF146Q9NTX7 359 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 ZNF214Q9UL59 606 aaPredicted RBP6.59□□□□□ -1.35
AFP-201ENST00000226359 OGDHLQ9ULD0 1010 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 ADAMTS5Q9UNA0 930 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 RBBP6Q7Z6E9 1792 aaKnown RBP6.59□□□□□ -1.35
AFP-201ENST00000226359 SYNGAP1Q96PV0 1343 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 TTLL8A6PVC2 850 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 SEPT4O43236 478 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 ALAS1P13196 640 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 GSPT1P15170 499 aaKnown RBP6.58□□□□□ -1.36
AFP-201ENST00000226359 RHOQP17081 205 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 BRD2P25440 801 aaKnown RBP6.58□□□□□ -1.36
AFP-201ENST00000226359 CHMLP26374 656 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 CCND3P30281 292 aaPredicted RBP6.58□□□□□ -1.36
AFP-201ENST00000226359 CYP2C19P33261 490 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 POU4F2Q12837 409 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 TRAF1Q13077 416 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 TEAD4Q15561 434 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 ASPRV1Q53RT3 343 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 IFIT1BQ5T764 474 aaKnown RBP6.58□□□□□ -1.36
AFP-201ENST00000226359 DGKHQ86XP1 1220 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 ALDH16A1Q8IZ83 802 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 STAG2Q8N3U4 1231 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 NPLOC4Q8TAT6 608 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 MAML3Q96JK9 1138 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 TMEM47Q9BQJ4 181 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 KLK14Q9P0G3 267 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 ZHX1Q9UKY1 873 aaPredicted RBP6.58□□□□□ -1.36
AFP-201ENST00000226359 MGAMO43451 1857 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 NEDD4P46934 1319 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 FRMPD2Q68DX3 1309 aaPredicted RBP6.58□□□□□ -1.36
AFP-201ENST00000226359 ASB14A6NK59 587 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 B4E1Z4 1266 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 FOXP2O15409 715 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 PGK2P07205 417 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 CYBAP13498 195 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 AKR1A1P14550 325 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 DEKP35659 375 aaKnown RBP6.58□□□□□ -1.36
AFP-201ENST00000226359 PAK2Q13177 524 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 C8orf34Q49A92 452 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 HS2ST1Q7LGA3 356 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 RNF180Q86T96 592 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 REPS2Q8NFH8 660 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 CHMP4CQ96CF2 233 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 MYO19Q96H55 970 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 PAWRQ96IZ0 340 aaKnown RBP6.58□□□□□ -1.36
AFP-201ENST00000226359 TRERF1Q96PN7 1200 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 PHACTR1Q9C0D0 580 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 ADD3Q9UEY8 706 aaKnown RBP6.58□□□□□ -1.36
AFP-201ENST00000226359 PRR12Q9ULL5 1215 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 ZNF236Q9UL36 1845 aa6.58□□□□□ -1.36
AFP-201ENST00000226359 A0A0G2JMZ2 1700 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 TNKSO95271 1327 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 DNM1LO00429 736 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 NMT2O60551 498 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 COBLO75128 1261 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 ICAM1P05362 532 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 PARP1P09874 1014 aaKnown RBP6.57□□□□□ -1.36
AFP-201ENST00000226359 ATF4P18848 351 aaPredicted RBP6.57□□□□□ -1.36
AFP-201ENST00000226359 EIF4BP23588 611 aaKnown RBP6.57□□□□□ -1.36
AFP-201ENST00000226359 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.57□□□□□ -1.362e-18■■■■□ 20.5
AFP-201ENST00000226359 GNASQ5JWF2 1037 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 NSMFQ6X4W1 530 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 NCOA7Q8NI08 942 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 FBF1Q8TES7 1133 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 IPO9Q96P70 1041 aaKnown RBP6.57□□□□□ -1.36
AFP-201ENST00000226359 OSBPL7Q9BZF2 842 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 UPF2Q9HAU5 1272 aaKnown RBP6.57□□□□□ -1.36
AFP-201ENST00000226359 INCENPQ9NQS7 918 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 IL17RBQ9NRM6 502 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 DNMT3LQ9UJW3 386 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 FAM184BQ9ULE4 1060 aa6.57□□□□□ -1.36
AFP-201ENST00000226359 WDR19Q8NEZ3 1342 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 hCG_2014768A0A024R1R8 64 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 SOBPA7XYQ1 873 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 IFIT3O14879 490 aaKnown RBP6.56□□□□□ -1.36
AFP-201ENST00000226359 SGSM2O43147 1006 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 CDC45O75419 566 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 PDHBP11177 359 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 IRS1P35568 1242 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 ZNF543Q08ER8 600 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 WTAPQ15007 396 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 ZNF792Q3KQV3 632 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 BMP2KLQ5H9B9 411 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 BTNL9Q6UXG8 535 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 NFXL1Q6ZNB6 911 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 LYSMD3Q7Z3D4 306 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 CATIPQ7Z7H3 387 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 C7orf61Q8IZ16 206 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 GPR152Q8TDT2 470 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 ZKSCAN3Q9BRR0 538 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 RANBP17Q9H2T7 1088 aaKnown RBP6.56□□□□□ -1.36
AFP-201ENST00000226359 NEUROD4Q9HD90 331 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 XPNPEP3Q9NQH7 507 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 FLRT1Q9NZU1 646 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 KLHL42Q9P2K6 505 aa6.56□□□□□ -1.36
AFP-201ENST00000226359 GREB1LQ9C091 1923 aaPredicted RBP6.56□□□□□ -1.36
AFP-201ENST00000226359 ABCB11O95342 1321 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms