RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 MMGT1Q8N4V1 131 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 TBC1D5Q92609 795 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 NOX5Q96PH1 765 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 P2RX7Q99572 595 aaKnown RBP16.82■□□□□ 0.28
TGFB1-201ENST00000221930 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.82■□□□□ 0.28
TGFB1-201ENST00000221930 CEP72Q9P209 647 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 APBA3O96018 575 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 EEF2P13639 858 aaKnown RBP16.81■□□□□ 0.28
TGFB1-201ENST00000221930 GCFC2P16383 781 aaKnown RBP16.81■□□□□ 0.28
TGFB1-201ENST00000221930 TCP1P17987 556 aaKnown RBP16.81■□□□□ 0.28
TGFB1-201ENST00000221930 RAPGEF1Q13905 1077 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 ARSHQ5FYA8 562 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 SND1Q7KZF4 910 aaKnown RBP eCLIP16.81■□□□□ 0.288e-8■■■■□ 20.7
TGFB1-201ENST00000221930 ADAMTS1Q9UHI8 967 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 SH3BP1Q9Y3L3 701 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 GREB1LQ9C091 1923 aaPredicted RBP16.81■□□□□ 0.28
TGFB1-201ENST00000221930 SSU72P8A0A1W2PR75 194 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 PJA2O43164 708 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 PRLRP16471 622 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 RXRBP28702 533 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 SKIDA1Q1XH10 827 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 PRR16Q569H4 304 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 TRIM59Q8IWR1 403 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 FAM133AQ8N9E0 248 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 ANO3Q9BYT9 981 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 KCTD10Q9H3F6 313 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 RBM12Q9NTZ6 932 aaKnown RBP16.81■□□□□ 0.28
TGFB1-201ENST00000221930 FAM184BQ9ULE4 1060 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 PACSIN2Q9UNF0 486 aaPredicted RBP16.81■□□□□ 0.28
TGFB1-201ENST00000221930 KDM3AQ9Y4C1 1321 aa16.81■□□□□ 0.28
TGFB1-201ENST00000221930 G3V3G9 751 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 FTCDO95954 541 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 MAP2K2P36507 400 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 SEPT2Q15019 361 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 CDC37Q16543 378 aaPredicted RBP16.8■□□□□ 0.28
TGFB1-201ENST00000221930 HYIQ5T013 277 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 DCAF8Q5TAQ9 597 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 AENQ8WTP8 325 aaKnown RBP16.8■□□□□ 0.28
TGFB1-201ENST00000221930 PPM1EQ8WY54 764 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 TEKT1Q969V4 418 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 KCNMB3Q9NPA1 279 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 ADAMTSL1Q8N6G6 1762 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 A0A087X0T9 212 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 FAM228BP0C875 321 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 RNASE9P60153 205 aaKnown RBP16.8■□□□□ 0.28
TGFB1-201ENST00000221930 HDLBPQ00341 1268 aaKnown RBP16.8■□□□□ 0.28
TGFB1-201ENST00000221930 PABPC4Q13310 644 aaKnown RBP eCLIP16.8■□□□□ 0.282e-7■■■■□ 21.4
TGFB1-201ENST00000221930 USH1GQ495M9 461 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 CC2D2BQ6DHV5 1058 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 KIAA0825Q8IV33 1275 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 AFAP1L1Q8TED9 768 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 PACSIN1Q9BY11 444 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 BCAS3Q9H6U6 928 aa16.8■□□□□ 0.28
TGFB1-201ENST00000221930 GOLGA6BA6NDN3 693 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 MEIS2O14770 477 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 PALMO75781 387 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 SERPING1P05155 500 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 ACTN1P12814 892 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 KLRC1P26715 233 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 EPS15P42566 896 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 HHIPL2Q6UWX4 724 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 CATSPER3Q86XQ3 398 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 DNAAF5Q86Y56 855 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 DBNDD1Q9H9R9 158 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 MYH4Q9Y623 1939 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 DDTLA6NHG4 134 aaPredicted RBP16.79■□□□□ 0.28
TGFB1-201ENST00000221930 NR2F2P24468 414 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 PAFAH1B1P43034 410 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 HAUS3Q68CZ6 603 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 CEP63Q96MT8 703 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 EDEM3Q9BZQ6 932 aa16.79■□□□□ 0.28
TGFB1-201ENST00000221930 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
TGFB1-201ENST00000221930 IVLP07476 585 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 CALRP27797 417 aaKnown RBP16.78■□□□□ 0.28
TGFB1-201ENST00000221930 SLC12A3P55017 1021 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 KCNH2Q12809 1159 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 LRCH2Q5VUJ6 765 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 SLFN13Q68D06 897 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 ZNF572Q7Z3I7 529 aaPredicted RBP16.78■□□□□ 0.28
TGFB1-201ENST00000221930 RBM5P52756 815 aaKnown RBP eCLIP16.78■□□□□ 0.28
TGFB1-201ENST00000221930 ARHGAP4P98171 946 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 KLHL30Q0D2K2 578 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 KIAA0753Q2KHM9 967 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 LRRC31Q6UY01 552 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 MMS22LQ6ZRQ5 1243 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 PODNQ7Z5L7 613 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 STIM2Q9P246 746 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 ARFGEF1Q9Y6D6 1849 aa16.78■□□□□ 0.28
TGFB1-201ENST00000221930 ZSCAN5CA6NGD5 496 aaPredicted RBP16.77■□□□□ 0.28
TGFB1-201ENST00000221930 RBAK-RBAKDNI3L0D1 243 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 CRKP46108 304 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 USP11P51784 963 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 CYP4A11Q02928 519 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 IKQ13123 557 aaPredicted RBP16.77■□□□□ 0.28
TGFB1-201ENST00000221930 CERKLQ49MI3 558 aaPredicted RBP16.77■□□□□ 0.28
TGFB1-201ENST00000221930 C8orf74Q6P047 294 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 DHX36Q9H2U1 1008 aaKnown RBP16.77■□□□□ 0.28
TGFB1-201ENST00000221930 ESYT3A0FGR9 886 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 GDF11O95390 407 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 CPP00450 1065 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms