RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ZNF572Q7Z3I7 529 aaPredicted RBP24.47■■□□□ 1.51
CCDC9-201ENST00000221922 KRT26Q7Z3Y9 468 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 CDAN1Q8IWY9 1227 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 RANBP17Q9H2T7 1088 aaKnown RBP24.47■■□□□ 1.51
CCDC9-201ENST00000221922 FAM207AQ9NSI2 230 aaPredicted RBP24.47■■□□□ 1.51
CCDC9-201ENST00000221922 ITIH3Q06033 890 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 IFIH1Q9BYX4 1025 aaKnown RBP24.46■■□□□ 1.51
CCDC9-201ENST00000221922 JADE2Q9NQC1 790 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 SNX12Q9UMY4 172 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 DNM3Q9UQ16 869 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 POTEFA5A3E0 1075 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 FAM86B1E9PN63 330 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 WNT10BO00744 389 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 RPS6KA5O75582 802 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 FAM86B2P0C5J1 330 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 POTEIP0CG38 1075 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 MARSP56192 900 aaKnown RBP24.46■■□□□ 1.51
CCDC9-201ENST00000221922 POTEGQ6S5H5 508 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 POTEEQ6S8J3 1075 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 FAM160B2Q86V87 743 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 CATSPER3Q86XQ3 398 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 KCTD17Q8N5Z5 321 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 CAGE1Q8TC20 777 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 COG1Q8WTW3 980 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 TANGO6Q9C0B7 1094 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 RNF216Q9NWF9 866 aaPredicted RBP24.46■■□□□ 1.51
CCDC9-201ENST00000221922 HPCAL4Q9UM19 191 aa24.46■■□□□ 1.51
CCDC9-201ENST00000221922 ZC3H4Q9UPT8 1303 aaKnown RBP24.46■■□□□ 1.51
CCDC9-201ENST00000221922 TACC1O75410 805 aa24.45■■□□□ 1.5
CCDC9-201ENST00000221922 TAL1P17542 331 aaPredicted RBP24.45■■□□□ 1.5
CCDC9-201ENST00000221922 KIF11P52732 1056 aa24.45■■□□□ 1.5
CCDC9-201ENST00000221922 DALRD3Q5D0E6 543 aaKnown RBP24.45■■□□□ 1.5
CCDC9-201ENST00000221922 CREG2Q8IUH2 290 aa24.45■■□□□ 1.5
CCDC9-201ENST00000221922 UIMC1Q96RL1 719 aa24.45■■□□□ 1.5
CCDC9-201ENST00000221922 TAOK3Q9H2K8 898 aa24.45■■□□□ 1.5
CCDC9-201ENST00000221922 EMILIN3Q9NT22 766 aa24.45■■□□□ 1.5
CCDC9-201ENST00000221922 ATAD5Q96QE3 1844 aa24.45■■□□□ 1.5
CCDC9-201ENST00000221922 HOXA13P31271 388 aaPredicted RBP24.44■■□□□ 1.5
CCDC9-201ENST00000221922 CCNI2Q6ZMN8 369 aaPredicted RBP24.44■■□□□ 1.5
CCDC9-201ENST00000221922 MMGT1Q8N4V1 131 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 MYOZ2Q9NPC6 264 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 CWC15Q9P013 229 aaKnown RBP24.44■■□□□ 1.5
CCDC9-201ENST00000221922 TBC1D7Q9P0N9 293 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 SYF2O95926 243 aaKnown RBP24.44■■□□□ 1.5
CCDC9-201ENST00000221922 ASNSP08243 561 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 EIF4A3P38919 411 aaKnown RBP24.44■■□□□ 1.5
CCDC9-201ENST00000221922 RAD51AP2Q09MP3 1159 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 EDRF1Q3B7T1 1238 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 NBPF9Q3BBW0 867 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 MIGA2Q7L4E1 593 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 ZC3H3Q8IXZ2 948 aaKnown RBP24.44■■□□□ 1.5
CCDC9-201ENST00000221922 SYT2Q8N9I0 419 aaPredicted RBP24.44■■□□□ 1.5
CCDC9-201ENST00000221922 SCFD1Q8WVM8 642 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 BAP1Q92560 729 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 NUCKS1Q9H1E3 243 aaKnown RBP24.44■■□□□ 1.5
CCDC9-201ENST00000221922 CAPN6Q9Y6Q1 641 aa24.44■■□□□ 1.5
CCDC9-201ENST00000221922 CAPN2P17655 700 aa24.43■■□□□ 1.5
CCDC9-201ENST00000221922 ZNF76P36508 570 aa24.43■■□□□ 1.5
CCDC9-201ENST00000221922 ARSHQ5FYA8 562 aa24.43■■□□□ 1.5
CCDC9-201ENST00000221922 JDP2Q8WYK2 163 aa24.43■■□□□ 1.5
CCDC9-201ENST00000221922 KCTD10Q9H3F6 313 aa24.43■■□□□ 1.5
CCDC9-201ENST00000221922 FEM1BQ9UK73 627 aa24.43■■□□□ 1.5
CCDC9-201ENST00000221922 FAM184BQ9ULE4 1060 aa24.43■■□□□ 1.5
CCDC9-201ENST00000221922 SMCHD1A6NHR9 2005 aa24.43■■□□□ 1.5
CCDC9-201ENST00000221922 NPHP3-ACAD11A0A0J9YXS1 232 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 PJA2O43164 708 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 SPATA31C1P0DKV0 1188 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 CACNA2D4Q7Z3S7 1137 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 RUBCNQ92622 972 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 DEF6Q9H4E7 631 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 LRRC53A6NM62 1247 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 MSH4O15457 936 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 PRPF6O94906 941 aaKnown RBP24.42■■□□□ 1.5
CCDC9-201ENST00000221922 TNNT3P45378 269 aaPredicted RBP24.42■■□□□ 1.5
CCDC9-201ENST00000221922 TNIP1Q15025 636 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 ASTE1Q2TB18 679 aaPredicted RBP24.42■■□□□ 1.5
CCDC9-201ENST00000221922 LEKR1Q6ZMV7 388 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 RRAGAQ7L523 313 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 NELFCDQ8IXH7 590 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 SMCR8Q8TEV9 937 aaPredicted RBP24.42■■□□□ 1.5
CCDC9-201ENST00000221922 POLR3CQ9BUI4 534 aaPredicted RBP24.42■■□□□ 1.5
CCDC9-201ENST00000221922 FGFBP2Q9BYJ0 223 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 MYH10P35580 1976 aa24.42■■□□□ 1.5
CCDC9-201ENST00000221922 ZNF280AP59817 542 aaPredicted RBP24.41■■□□□ 1.5
CCDC9-201ENST00000221922 IRX5P78411 483 aaPredicted RBP24.41■■□□□ 1.5
CCDC9-201ENST00000221922 GIT2Q14161 759 aa24.41■■□□□ 1.5
CCDC9-201ENST00000221922 PDXDC1Q6P996 788 aa24.41■■□□□ 1.5
CCDC9-201ENST00000221922 TRIM59Q8IWR1 403 aa24.41■■□□□ 1.5
CCDC9-201ENST00000221922 MLXIPQ9HAP2 919 aa24.41■■□□□ 1.5
CCDC9-201ENST00000221922 CEP72Q9P209 647 aa24.41■■□□□ 1.5
CCDC9-201ENST00000221922 VAV3Q9UKW4 847 aa24.41■■□□□ 1.5
CCDC9-201ENST00000221922 MRPL11Q9Y3B7 192 aaKnown RBP24.41■■□□□ 1.5
CCDC9-201ENST00000221922 GCOM1H8Y6P7 765 aaPredicted RBP24.41■■□□□ 1.5
CCDC9-201ENST00000221922 RNF40O75150 1001 aa24.41■■□□□ 1.5
CCDC9-201ENST00000221922 PHACTR2O75167 634 aa24.41■■□□□ 1.5
CCDC9-201ENST00000221922 POLR2MP0CAP2 368 aa24.41■■□□□ 1.5
CCDC9-201ENST00000221922 CACNB1Q02641 598 aaPredicted RBP24.41■■□□□ 1.5
CCDC9-201ENST00000221922 C2orf54Q08AI8 447 aa24.41■■□□□ 1.5
CCDC9-201ENST00000221922 MAPK8IP2Q13387 824 aaPredicted RBP24.41■■□□□ 1.5
CCDC9-201ENST00000221922 ZHX3Q9H4I2 956 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms