RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 DDX5P17844 614 aaKnown RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 SGMS1Q86VZ5 419 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 DHX40Q8IX18 779 aaKnown RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 MGARPQ8TDB4 240 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 JARID2Q92833 1246 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 STAMBPL1Q96FJ0 436 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 ATP6V1G3Q96LB4 118 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 TRIM55Q9BYV6 548 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 EPN3Q9H201 632 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 ZNF148Q9UQR1 794 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 SUGT1Q9Y2Z0 365 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 KAT6AQ92794 2004 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 GMNCA6NCL1 334 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 BUB1O43683 1085 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 SLC1A1P43005 524 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 IRX1P78414 480 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 MDM2Q00987 491 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 PKP1Q13835 747 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 CERKLQ49MI3 558 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 FAM102BQ5T8I3 360 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 FAM160B2Q86V87 743 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 N4BP2L2Q92802 583 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 MAP3K14Q99558 947 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 MTRQ99707 1265 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 KLC2Q9H0B6 622 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 KIAA1024Q9UPX6 916 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 ANGPTL3Q9Y5C1 460 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 AGLP35573 1532 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 NPHP4O75161 1426 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 PDS5AQ29RF7 1337 aaKnown RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 SOWAHDA6NJG2 315 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 MAFGO15525 162 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 PFDN1O60925 122 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 SPAG7O75391 227 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 MMEP08473 750 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 STAT2P52630 851 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 POLGP54098 1239 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 ODR4Q5SWX8 454 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 AGBL2Q5U5Z8 902 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 FMR1NBQ8N0W7 255 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 ANKRD7Q92527 254 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 RPS6KC1Q96S38 1066 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 TSC22D3Q99576 134 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 SMG5Q9UPR3 1016 aaKnown RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 PCDHA1Q9Y5I3 950 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 C3P01024 1663 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 TMEM131LA2VDJ0 1609 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 TYW5A2RUC4 315 aaKnown RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 PALM3A6NDB9 673 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 USP17L12C9JPN9 530 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 USP17L21D6R901 530 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 TMEM191BP0C7N4 346 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 ABCB4P21439 1286 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 ARL4CP56559 192 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 RNASE9P60153 205 aaKnown RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 MECOMQ03112 1051 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 DPH6Q7L8W6 267 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 FRMD5Q7Z6J6 570 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 SCYL3Q8IZE3 742 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 PDCD7Q8N8D1 485 aaKnown RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 ANKRD42Q8N9B4 389 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 HELBQ8NG08 1087 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 LRRC37BQ96QE4 947 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 ZBTB21Q9ULJ3 1066 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 USTQ9Y2C2 406 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 IVNS1ABPQ9Y6Y0 642 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 LOXHD1Q8IVV2 1947 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 MYO1CO00159 1063 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 CHGBP05060 677 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ZSCAN20P17040 1043 aaPredicted RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 TAC1P20366 129 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ARHGAP44Q17R89 818 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 APBB2Q92870 758 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ZNF653Q96CK0 615 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ZNF594Q96JF6 807 aaPredicted RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 SH3GL3Q99963 347 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 LGR6Q9HBX8 967 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 GPHNQ9NQX3 736 aaPredicted RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 INTUQ9ULD6 942 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ASAP2O43150 1006 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 CCDC22O60826 627 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 SMARCA1P28370 1054 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 EIF4A3P38919 411 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 MMP14P50281 582 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 GABPAQ06546 454 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 TAF11Q15544 211 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ARL13BQ3SXY8 428 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 KMT5BQ4FZB7 885 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 RASGRP2Q7LDG7 609 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 RSPH3Q86UC2 560 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 TERB1Q8NA31 727 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 COG1Q8WTW3 980 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 SNF8Q96H20 258 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 OSBPL9Q96SU4 736 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 TRAIPQ9BWF2 469 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 SLC39A2Q9NP94 309 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 CAPN11Q9UMQ6 739 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ATP8A1Q9Y2Q0 1164 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms