RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 MED24O75448 989 aa30.57■■■□□ 2.48
CHMP4B-201ENST00000217402 HOXD8P13378 290 aaPredicted RBP30.57■■■□□ 2.48
CHMP4B-201ENST00000217402 LRRC41Q15345 812 aa30.57■■■□□ 2.48
CHMP4B-201ENST00000217402 GLG1Q92896 1179 aa30.57■■■□□ 2.48
CHMP4B-201ENST00000217402 LXNQ9BS40 222 aa30.57■■■□□ 2.48
CHMP4B-201ENST00000217402 IGKV6D-21A0A0A0MT36 114 aa30.56■■■□□ 2.48
CHMP4B-201ENST00000217402 GADD45BO75293 160 aaPredicted RBP30.56■■■□□ 2.48
CHMP4B-201ENST00000217402 NKX3-2P78367 333 aa30.56■■■□□ 2.48
CHMP4B-201ENST00000217402 RESP18Q5W5W9 173 aa30.56■■■□□ 2.48
CHMP4B-201ENST00000217402 CATSPER3Q86XQ3 398 aa30.56■■■□□ 2.48
CHMP4B-201ENST00000217402 TPH2Q8IWU9 490 aa30.56■■■□□ 2.48
CHMP4B-201ENST00000217402 KLHDC9Q8NEP7 349 aa30.56■■■□□ 2.48
CHMP4B-201ENST00000217402 RASSF8Q8NHQ8 419 aa30.56■■■□□ 2.48
CHMP4B-201ENST00000217402 HSD17B14Q9BPX1 270 aa30.56■■■□□ 2.48
CHMP4B-201ENST00000217402 EMSYQ7Z589 1322 aa30.56■■■□□ 2.48
CHMP4B-201ENST00000217402 POTEB3A0JP26 581 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 LGR5O75473 907 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 SLITRK3O94933 977 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 P4HBP07237 508 aaKnown RBP30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 SPATA31C1P0DKV0 1188 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 TXLNAP40222 546 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 FAM160B1Q5W0V3 765 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 POTEBQ6S5H4 581 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 NEK9Q8TD19 979 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 U2AF1L4Q8WU68 220 aaKnown RBP30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 PLIN2Q99541 437 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 WRAP73Q9P2S5 460 aaPredicted RBP30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 STK24Q9Y6E0 443 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 IGSF9BQ9UPX0 1349 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 GOLGA6L22H0YM25 854 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 CST5P28325 142 aaPredicted RBP30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 QARSP47897 775 aaKnown RBP30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 STAT5BP51692 787 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 KARSQ15046 597 aaKnown RBP30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 KCNA10Q16322 511 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 PDXDC2PQ6P474 469 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 TRMT1LQ7Z2T5 733 aaKnown RBP30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 ATP6V0A1Q93050 837 aa30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 POLR3CQ9BUI4 534 aaPredicted RBP30.55■■■□□ 2.48
CHMP4B-201ENST00000217402 A0A1W2PQ27 194 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 A0A1W2PQ64 194 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 A0A1W2PQD8 194 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 ZEB2O60315 1214 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 GJB1P08034 283 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 MARK3P27448 753 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 RPA1P27694 616 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 PSMC5P62195 406 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 ECM1Q16610 540 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 COL13A1Q5TAT6 717 aaPredicted RBP30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 POTEGQ6S5H5 508 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 FSIP1Q8NA03 581 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 CDK5RAP3Q96JB5 506 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 C16orf70Q9BSU1 422 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 TUFT1Q9NNX1 390 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 FAM13BQ9NYF5 915 aa30.54■■■□□ 2.48
CHMP4B-201ENST00000217402 A0A1B0GVL5 298 aa30.53■■■□□ 2.48
CHMP4B-201ENST00000217402 CMA1P23946 247 aa30.53■■■□□ 2.48
CHMP4B-201ENST00000217402 PURAQ00577 322 aaKnown RBP30.53■■■□□ 2.48
CHMP4B-201ENST00000217402 ARRDC4Q8NCT1 418 aa30.53■■■□□ 2.48
CHMP4B-201ENST00000217402 AFAP1L1Q8TED9 768 aa30.53■■■□□ 2.48
CHMP4B-201ENST00000217402 PANK2Q9BZ23 570 aa30.53■■■□□ 2.48
CHMP4B-201ENST00000217402 CCSER1Q9C0I3 900 aa30.53■■■□□ 2.48
CHMP4B-201ENST00000217402 SMARCAD1Q9H4L7 1026 aa30.53■■■□□ 2.48
CHMP4B-201ENST00000217402 MAFBQ9Y5Q3 323 aaPredicted RBP30.53■■■□□ 2.48
CHMP4B-201ENST00000217402 ASGR1P07306 291 aa30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 CHMP4BP1P59074 171 aa30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 CCSAPQ6IQ19 270 aaPredicted RBP30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 CXCL17Q6UXB2 119 aa30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 CKAP2LQ8IYA6 745 aa30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 PCSK9Q8NBP7 692 aaKnown RBP30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 MRPS27Q92552 414 aaKnown RBP30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 CALML4Q96GE6 196 aa30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 GOLPH3LQ9H4A5 285 aa30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 ZSWIM4Q9H7M6 989 aa30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 OGDHLQ9ULD0 1010 aa30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 KIAA1024Q9UPX6 916 aa30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 KDM3AQ9Y4C1 1321 aa30.52■■■□□ 2.48
CHMP4B-201ENST00000217402 ZNF862O60290 1169 aa30.51■■■□□ 2.48
CHMP4B-201ENST00000217402 SGPL1O95470 568 aa30.51■■■□□ 2.48
CHMP4B-201ENST00000217402 PFKFB1P16118 471 aa30.51■■■□□ 2.48
CHMP4B-201ENST00000217402 PRKCEQ02156 737 aa30.51■■■□□ 2.48
CHMP4B-201ENST00000217402 GRB10Q13322 594 aa30.51■■■□□ 2.48
CHMP4B-201ENST00000217402 PDILTQ8N807 584 aa30.51■■■□□ 2.48
CHMP4B-201ENST00000217402 PNMA5Q96PV4 448 aa30.51■■■□□ 2.48
CHMP4B-201ENST00000217402 TMEM106CQ9BVX2 250 aa30.51■■■□□ 2.48
CHMP4B-201ENST00000217402 DDX19AQ9NUU7 478 aaKnown RBP30.51■■■□□ 2.48
CHMP4B-201ENST00000217402 ZNF215Q9UL58 517 aaPredicted RBP30.51■■■□□ 2.48
CHMP4B-201ENST00000217402 A0A087WWV3 80 aa30.51■■■□□ 2.47
CHMP4B-201ENST00000217402 TFRCP02786 760 aaKnown RBP30.51■■■□□ 2.47
CHMP4B-201ENST00000217402 PLPPR4Q7Z2D5 763 aa30.51■■■□□ 2.47
CHMP4B-201ENST00000217402 ERAP1Q9NZ08 941 aa30.51■■■□□ 2.47
CHMP4B-201ENST00000217402 CCDC39Q9UFE4 941 aa30.51■■■□□ 2.47
CHMP4B-201ENST00000217402 A0A087X0B3 334 aa30.5■■■□□ 2.47
CHMP4B-201ENST00000217402 KBTBD13C9JR72 458 aa30.5■■■□□ 2.47
CHMP4B-201ENST00000217402 H3BRB1 525 aa30.5■■■□□ 2.47
CHMP4B-201ENST00000217402 KPNA6O60684 536 aa30.5■■■□□ 2.47
CHMP4B-201ENST00000217402 F2P00734 622 aa30.5■■■□□ 2.47
CHMP4B-201ENST00000217402 PLCG1P19174 1290 aa30.5■■■□□ 2.47
CHMP4B-201ENST00000217402 UBE2HP62256 183 aa30.5■■■□□ 2.47
CHMP4B-201ENST00000217402 KAT2BQ92831 832 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms