RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 STIM2Q9P246 746 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 NFU1Q9UMS0 254 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 SLURP2P0DP57 97 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 PLCB3Q01970 1234 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 ARHGEF16Q5VV41 709 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 ANKS1AQ92625 1134 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 NUDT12Q9BQG2 462 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 SNX12Q9UMY4 172 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 FGRP09769 529 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 EIF2AK2P19525 551 aaKnown RBP13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 GRIPAP1Q4V328 841 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 WDR44Q5JSH3 913 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 HHIPL2Q6UWX4 724 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 KIFAP3Q92845 792 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 CCDC114Q96M63 670 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 MTRQ99707 1265 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 LRRC10BA6NIK2 292 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 ACTN1P12814 892 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 IL1R1P14778 569 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 GSTA5Q7RTV2 222 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 CCDC105Q8IYK2 499 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 KIAA0895Q8NCT3 520 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 DUSP9Q99956 384 aaKnown RBP13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 EIF2AK1Q9BQI3 630 aaKnown RBP13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 CAPS2Q9BXY5 557 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 DDX4Q9NQI0 724 aaKnown RBP13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 PLAGL2Q9UPG8 496 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 PSMD14O00487 310 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 HOXA7P31268 230 aaPredicted RBP13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 CENPPQ6IPU0 288 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 BANK1Q8NDB2 785 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 REEP2Q9BRK0 252 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 LRRC1Q9BTT6 524 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 TNNI1P19237 187 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 MESDQ14696 234 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 RUFY4Q6ZNE9 571 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 TMEM139Q8IV31 216 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 HOOK2Q96ED9 719 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 SH2D3AQ9BRG2 576 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 RNF14Q9UBS8 474 aa13.47□□□□□ -0.25
TM9SF4-201ENST00000217315 PGRMC1O00264 195 aaKnown RBP13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 LMNB1P20700 586 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 GGCXP38435 758 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 RHBDL3P58872 404 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 MCF2L2Q86YR7 1114 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 UHMK1Q8TAS1 419 aaKnown RBP13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 BBXQ8WY36 941 aaPredicted RBP13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 MS4A14Q96JA4 679 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 IWS1Q96ST2 819 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 FUT8Q9BYC5 575 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 ZNF341Q9BYN7 854 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 PPANQ9NQ55 473 aaKnown RBP13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 NYAP2Q9P242 653 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 STRIP1Q5VSL9 837 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 SLC51AQ86UW1 340 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 RIN2Q8WYP3 895 aaPredicted RBP13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 UBE2TQ9NPD8 197 aaPredicted RBP13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 TYW1Q9NV66 732 aaKnown RBP13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 ZNF446Q9NWS9 450 aa13.46□□□□□ -0.25
TM9SF4-201ENST00000217315 PARP4Q9UKK3 1724 aaKnown RBP13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 GOLGA8IPA6NC78 632 aa13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 GOLGA8JA6NMD2 632 aa13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 GOLGA8KD6RF30 607 aa13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 ANKRD65E5RJM6 399 aa13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 CCT5P48643 541 aa13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 HERVK_113P62684 666 aa13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 RNF10Q8N5U6 811 aaKnown RBP13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 MED15Q96RN5 788 aa13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 SYNCQ9H7C4 482 aa13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 ASIC3Q9UHC3 531 aa13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 DNAJC12Q9UKB3 198 aa13.46□□□□□ -0.26
TM9SF4-201ENST00000217315 RNF225M0QZC1 329 aaPredicted RBP13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 ADAMTS3O15072 1205 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 TRIM49P0CI25 452 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 TRIM49CP0CI26 452 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 SLC9A1P19634 815 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 NPY5RQ15761 445 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 EDEM3Q9BZQ6 932 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 BCS1LQ9Y276 419 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 ABL1P00519 1130 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 STRN3Q13033 797 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 TNFAIP1Q13829 316 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 RSRC2Q7L4I2 434 aaKnown RBP13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 DPH6Q7L8W6 267 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 COG1Q8WTW3 980 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 POMGNT1Q8WZA1 660 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 PRR12Q9ULL5 1215 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 USTQ9Y2C2 406 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 CAPN6Q9Y6Q1 641 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 N4BP1O75113 896 aaKnown RBP13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 MYBP10242 640 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 KCNK18Q7Z418 384 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 CATSPER3Q86XQ3 398 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 PNMA5Q96PV4 448 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 RAB17Q9H0T7 212 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms