RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CIITAP33076 1130 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 POLA2Q14181 598 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 SUPT20HQ8NEM7 779 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 NT5C1BQ96P26 610 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 NOVA2Q9UNW9 492 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 ZBED1O96006 694 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 POLR2MP0CAP2 368 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 LRRC8EQ6NSJ5 796 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 RNF135Q8IUD6 432 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 IFT43Q96FT9 208 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 TMEM60Q9H2L4 133 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 HPCAL4Q9UM19 191 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 H0YIN7 160 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 PPP2R5BQ15173 497 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 AKAP4Q5JQC9 854 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 KRT40Q6A162 431 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 PPP1R36Q96LQ0 422 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 AGBL1Q96MI9 1066 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 VPS39Q96JC1 886 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 POLIQ9UNA4 740 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 IPO5O00410 1097 aaKnown RBP15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 PYGMP11217 842 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 GSPT1P15170 499 aaKnown RBP15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 KRT26Q7Z3Y9 468 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 ZNF555Q8NEP9 628 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 CHURC1Q8WUH1 139 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 HPS4Q9NQG7 708 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 SENP1Q9P0U3 644 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 TRAF3IP3Q9Y228 551 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 TRIM71Q2Q1W2 868 aaKnown RBP15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 KRT77Q7Z794 578 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 TLK2Q86UE8 772 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 CDR2LQ86X02 465 aaPredicted RBP15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 CASS4Q9NQ75 786 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 ODR4Q5SWX8 454 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 TEDDM1Q5T9Z0 273 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 BTBD6Q96KE9 485 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 AURKCQ9UQB9 309 aa15.66■□□□□ 0.1
SPTLC2-201ENST00000216484 PFKFB1P16118 471 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 MLH1P40692 756 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 TFAP4Q01664 338 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 ADCY2Q08462 1091 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 TSC22D1Q15714 1073 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 OLFM3Q96PB7 478 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 SIX6OS1Q8N1H7 587 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 CYP4F11Q9HBI6 524 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 COPEO14579 308 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 LINS1Q8NG48 757 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 AS3MTQ9HBK9 375 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 PRKAG2Q9UGJ0 569 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 SMARCA1P28370 1054 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 CENPAP49450 140 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 PAPOLAP51003 745 aaKnown RBP15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 DR1Q01658 176 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 MYH6P13533 1939 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 DEAF1O75398 565 aaPredicted RBP15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 ATP5HO75947 161 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 TMED10P49755 219 aaKnown RBP15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 POU5F1BQ06416 359 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 MYO1EQ12965 1108 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 ADALQ6DHV7 355 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 KIAA1024Q9UPX6 916 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 SNX14Q9Y5W7 946 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 ZNF532Q9HCE3 1301 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 MMEP08473 750 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 LUZP2Q86TE4 346 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 OPTNQ96CV9 577 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 TUBGCP2Q9BSJ2 902 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 FAM167BQ9BTA0 163 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 ZWILCHQ9H900 591 aa15.65■□□□□ 0.1
SPTLC2-201ENST00000216484 CYP4A11Q02928 519 aa15.64■□□□□ 0.1
SPTLC2-201ENST00000216484 BLIDQ8IZY5 108 aa15.64■□□□□ 0.1
SPTLC2-201ENST00000216484 TTC8Q8TAM2 541 aa15.64■□□□□ 0.1
SPTLC2-201ENST00000216484 ZNF594Q96JF6 807 aaPredicted RBP15.64■□□□□ 0.1
SPTLC2-201ENST00000216484 PBKQ96KB5 322 aa15.64■□□□□ 0.1
SPTLC2-201ENST00000216484 AP1M1Q9BXS5 423 aa15.64■□□□□ 0.1
SPTLC2-201ENST00000216484 ZCWPW1Q9H0M4 648 aa15.64■□□□□ 0.1
SPTLC2-201ENST00000216484 NXF1Q9UBU9 619 aaKnown RBP15.64■□□□□ 0.1
SPTLC2-201ENST00000216484 INO80B-WBP1J3KQ70 363 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 TNNI3KQ59H18 835 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 INO80BQ9C086 356 aaPredicted RBP15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 PARVGQ9HBI0 331 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 FPGT-TNNI3KV9GXZ4 949 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 BAZ2BQ9UIF8 2168 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 SUPT3HB4E1H0 165 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 GRK2P25098 689 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 TFDP1Q14186 410 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 PPP1R14AQ96A00 147 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 THAP11Q96EK4 314 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 SH3GL1Q99961 368 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 YIPF2Q9BWQ6 316 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 GOLGA8MH3BSY2 632 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 ZSCAN20P17040 1043 aaPredicted RBP15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 TRIM69Q86WT6 500 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 RETREG2Q8NC44 543 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 AFF4Q9UHB7 1163 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 CAPZA2P47755 286 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 CYTH1Q15438 398 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 DCTPP1Q9H773 170 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 ATP8A2Q9NTI2 1148 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms