RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 ANAPC4Q9UJX5 808 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 SERPINA10Q9UK55 444 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 SLC12A4Q9UP95 1085 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 ZNF711Q9Y462 761 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 SNX3O60493 162 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 FAM200BP0CF97 657 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 RARAP10276 462 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 COPB2P35606 906 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 PEX5P50542 639 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 COG7P83436 770 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 UAP1Q16222 522 aaPredicted RBP9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 ZNF662Q6ZS27 426 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 TMC3Q7Z5M5 1100 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 SH3RF1Q7Z6J0 888 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 CABP7Q86V35 215 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 ZNF507Q8TCN5 953 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 HAUS1Q96CS2 278 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 CENPKQ9BS16 269 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 RNPEPL1Q9HAU8 725 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 TBC1D7Q9P0N9 293 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 ABCC6O95255 1503 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 ATP9AO75110 1047 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 ITGA4P13612 1032 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 SP100P23497 879 aaPredicted RBP9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 LONP1P36776 959 aaKnown RBP9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 LRRC41Q15345 812 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 EPS8L3Q8TE67 593 aaKnown RBP9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 CARD9Q9H257 536 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 KANSL2Q9H9L4 492 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 CCDC87Q9NVE4 849 aa9.49□□□□□ -0.89
SUPT16H-201ENST00000216297 MAP3K15Q6ZN16 1313 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 SNRPA1P09661 255 aaKnown RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 ATP6V1C1P21283 382 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 ADAM9Q13443 819 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 SLC4A8Q2Y0W8 1093 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 EARS2Q5JPH6 523 aaKnown RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 ZNF790Q6PG37 636 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 DNAAF5Q86Y56 855 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 FBXL16Q8N461 479 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 STK32AQ8WU08 396 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 RPS6KL1Q9Y6S9 549 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 KIF20BQ96Q89 1820 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 RFX5P48382 616 aaPredicted RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 PTDSS1P48651 473 aaKnown RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 HLFQ16534 295 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 ZFYVE27Q5T4F4 411 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 CCDC174Q6PII3 467 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 SGMS1Q86VZ5 419 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 APLFQ8IW19 511 aaPredicted RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 NELFCDQ8IXH7 590 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 PDCD7Q8N8D1 485 aaKnown RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 HELBQ8NG08 1087 aaPredicted RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 U2AF1L4Q8WU68 220 aaKnown RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 SMC6Q96SB8 1091 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 CYTH2Q99418 400 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 CCDC77Q9BR77 488 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 PACSIN1Q9BY11 444 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 RNF26Q9BY78 433 aaPredicted RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 NEUROG2Q9H2A3 272 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 WDR35Q9P2L0 1181 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 IQSEC3Q9UPP2 1182 aaPredicted RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 AFF2P51816 1311 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 WDR19Q8NEZ3 1342 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 MYH10P35580 1976 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 TMEM120BA0PK00 339 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 AGTP01019 485 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 LETM2Q2VYF4 491 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 MTHFD1LQ6UB35 978 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 SV2BQ7L1I2 683 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 C1orf131Q8NDD1 294 aaKnown RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 ANKS1AQ92625 1134 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 PURBQ96QR8 312 aaKnown RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 DDX50Q9BQ39 737 aaKnown RBP9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 UBA5Q9GZZ9 404 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 TNKSO95271 1327 aa9.48□□□□□ -0.89
SUPT16H-201ENST00000216297 MAPK13O15264 365 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 ZNF189O75820 626 aaPredicted RBP9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 BRAFP15056 766 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 PPP1R2P41236 205 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 STK4Q13043 487 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 LONRF1Q17RB8 773 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 FAM83BQ5T0W9 1011 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 PDXDC1Q6P996 788 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 CEP70Q8NHQ1 597 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 BICD1Q96G01 975 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 FRMPD1Q5SYB0 1578 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 NRKQ7Z2Y5 1582 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 RTL9Q8NET4 1388 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 EPHB6O15197 1021 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 H2AFZP0C0S5 128 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 ETS2P15036 469 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 PDE6AP16499 860 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 ZNF211Q13398 564 aaPredicted RBP9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 NAB2Q15742 525 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 H2AFVQ71UI9 128 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 SYCE1Q8N0S2 351 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 ARL10Q8N8L6 244 aa9.47□□□□□ -0.89
SUPT16H-201ENST00000216297 ANKRD27Q96NW4 1050 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms