RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 RAD17O75943 681 aa11.79□□□□□ -0.52
APOBEC3D-201ENST00000216099 JAG1P78504 1218 aa11.79□□□□□ -0.52
APOBEC3D-201ENST00000216099 RRP1BQ14684 758 aaKnown RBP11.79□□□□□ -0.52
APOBEC3D-201ENST00000216099 PTPN14Q15678 1187 aa11.79□□□□□ -0.52
APOBEC3D-201ENST00000216099 HYIQ5T013 277 aa11.79□□□□□ -0.52
APOBEC3D-201ENST00000216099 FBXO11Q86XK2 927 aa11.79□□□□□ -0.52
APOBEC3D-201ENST00000216099 TMEM139Q8IV31 216 aa11.79□□□□□ -0.52
APOBEC3D-201ENST00000216099 PNMA5Q96PV4 448 aa11.79□□□□□ -0.52
APOBEC3D-201ENST00000216099 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
APOBEC3D-201ENST00000216099 PSMA7O14818 248 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 ARHGAP6O43182 974 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 C21orf62-AS1Q17RA5 79 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 PLEKHG4Q58EX7 1191 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 TC2NQ8N9U0 490 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 CRYGNQ8WXF5 182 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 PANX2Q96RD6 677 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 ANO3Q9BYT9 981 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 ARNT2Q9HBZ2 717 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 GEMIN8Q9NWZ8 242 aaKnown RBP11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 TMX2Q9Y320 296 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 KDM3AQ9Y4C1 1321 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 PVALEFA0A1B0GWK0 134 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 TCP10L2B9ZVM9 353 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 STX10O60499 249 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 PLA2G6O60733 806 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 KRT31Q15323 416 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 HSP90AA4PQ58FG1 418 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 TCP11X2Q5H9J9 407 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 KRT79Q5XKE5 535 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 ICE2Q659A1 982 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 CEP135Q66GS9 1140 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 SV2BQ7L1I2 683 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 DEFB132Q7Z7B7 95 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 HAS1Q92839 578 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 PPP1R13BQ96KQ4 1090 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 SRA1Q9HD15 236 aaKnown RBP11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 BLOC1S4Q9NUP1 217 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 EXOC1Q9NV70 894 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 SNTG2Q9NY99 539 aa11.78□□□□□ -0.52
APOBEC3D-201ENST00000216099 PARP14Q460N5 1801 aa11.77□□□□□ -0.52
APOBEC3D-201ENST00000216099 DOCK1Q14185 1865 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 MEIS2O14770 477 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 TREHO43280 583 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 EVI5O60447 810 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 ATF4P18848 351 aaPredicted RBP11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 EEF1GP26641 437 aaKnown RBP11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 MAP3K10Q02779 954 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 SLC20A2Q08357 652 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 RAD54LQ92698 747 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 CCDC51Q96ER9 411 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 CDK5RAP3Q96JB5 506 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 PLIN2Q99541 437 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 KCNMB3Q9NPA1 279 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 ZBTB21Q9ULJ3 1066 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 BICDL2A1A5D9 508 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 KCNJ18B7U540 433 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 IFRD1O00458 451 aaPredicted RBP11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 TBX3O15119 743 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 COPB1P53618 953 aaKnown RBP11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 PSMD2Q13200 908 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 TRIM14Q14142 442 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 KCNJ12Q14500 433 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 FOXR2Q6PJQ5 311 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 TAS1R3Q7RTX0 852 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 LARP4BQ92615 738 aaKnown RBP11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 YY1AP1Q9H869 796 aa11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 CXXC1Q9P0U4 656 aaPredicted RBP11.77□□□□□ -0.53
APOBEC3D-201ENST00000216099 A0A1W2PRG0 241 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 CLRN2A0PK11 232 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 AKR1B15C9JRZ8 316 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 CCNE1P24864 410 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 ASIC1P78348 528 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 NR1H3Q13133 447 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 TOMM20Q15388 145 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 TTI2Q6NXR4 508 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 UNC13DQ70J99 1090 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 SLFN12Q8IYM2 578 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 LILRB2Q8N423 598 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 PDCL2Q8N4E4 241 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 SNX29Q8TEQ0 813 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 BAG1Q99933 345 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 NAA15Q9BXJ9 866 aaKnown RBP11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 MUC3BQ9H195 1237 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 SH2D4AQ9H788 454 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 PGAP2Q9UHJ9 254 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 DIS3Q9Y2L1 958 aaKnown RBP11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 DICER1Q9UPY3 1922 aaKnown RBP11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 TEX33O43247 280 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 SCGB1D2O95969 90 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 SREBF1P36956 1147 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 DAB2P98082 770 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 Q4G0T1 1027 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 PPFIBP1Q86W92 1011 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 P2RX5Q93086 422 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 NUP88Q99567 741 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 APBA2Q99767 749 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 NT5C3AQ9H0P0 336 aa11.76□□□□□ -0.53
APOBEC3D-201ENST00000216099 PUF60Q9UHX1 559 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms