RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 FOXN1O15353 648 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 MBD3O95983 291 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 ZNF865P0CJ78 1059 aaPredicted RBP11.14□□□□□ -0.63
RTCB-201ENST00000216038 SMPD1P17405 629 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 PLCG1P19174 1290 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 CNGA1P29973 690 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 ACTR2P61160 394 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 NEDD9Q14511 834 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 HSDL1Q3SXM5 330 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 POTEGQ6S5H5 508 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 CATSPER3Q86XQ3 398 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 TPH2Q8IWU9 490 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 PDCL2Q8N4E4 241 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 STAMQ92783 540 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 ERCC4Q92889 916 aaPredicted RBP11.14□□□□□ -0.63
RTCB-201ENST00000216038 DYDC2Q96IM9 177 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 NFASCO94856 1347 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 ZBTB39O15060 712 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 IGHA2P01877 340 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 SPATA31C1P0DKV0 1188 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 IRX5P78411 483 aaPredicted RBP11.14□□□□□ -0.63
RTCB-201ENST00000216038 KRT76Q01546 638 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 TNFAIP2Q03169 654 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 CACNB2Q08289 660 aaPredicted RBP11.14□□□□□ -0.63
RTCB-201ENST00000216038 GRB10Q13322 594 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 DHX8Q14562 1220 aaKnown RBP11.14□□□□□ -0.63
RTCB-201ENST00000216038 CELF3Q5SZQ8 465 aaKnown RBP11.14□□□□□ -0.63
RTCB-201ENST00000216038 MFSD14CQ5VZR4 134 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 KCNV1Q6PIU1 500 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 KCNK18Q7Z418 384 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 GRAMD1CQ8IYS0 662 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 CDK5RAP3Q96JB5 506 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 SPATA33Q96N06 139 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 PNMA5Q96PV4 448 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 CCSER1Q9C0I3 900 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 DDX19AQ9NUU7 478 aaKnown RBP11.14□□□□□ -0.63
RTCB-201ENST00000216038 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 WRAP73Q9P2S5 460 aaPredicted RBP11.14□□□□□ -0.63
RTCB-201ENST00000216038 SERTAD1Q9UHV2 236 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 KIAA1024Q9UPX6 916 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 PTCH2Q9Y6C5 1203 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 RBM47A0AV96 593 aaKnown RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 WDR64B1ANS9 1081 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 KINO60870 393 aaKnown RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 SLITRK3O94933 977 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 MYCP01106 439 aaPredicted RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 STAT6P42226 847 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 LBX1P52954 281 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 PSMC6P62333 389 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 IRF5Q13568 498 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 UGCGQ16739 394 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 UVSSAQ2YD98 709 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 RRAGBQ5VZM2 374 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 METTL7BQ6UX53 244 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 ERMNQ8TAM6 284 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 CALML4Q96GE6 196 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 ARID3AQ99856 593 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 HSD17B14Q9BPX1 270 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 LXNQ9BS40 222 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 SPTLC3Q9NUV7 552 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 OGFRQ9NZT2 677 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 FAM237AA0A1B0GTK4 181 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 E9PMD0 336 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 NOP56O00567 594 aaKnown RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 BACH1O14867 736 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 GNRH1P01148 92 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 HSPA1AP0DMV8 641 aaKnown RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 HSPA1BP0DMV9 641 aaKnown RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 RPA1P27694 616 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 CASP1P29466 404 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 CCND3P30281 292 aaPredicted RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 ARHGAP1Q07960 439 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 NOLC1Q14978 699 aaKnown RBP eCLIP11.13□□□□□ -0.63
RTCB-201ENST00000216038 ARHGEF6Q15052 776 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 EPHA7Q15375 998 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 SYCP1Q15431 976 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 DUSP28Q4G0W2 176 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 NAALADL2Q58DX5 795 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 HAUS3Q68CZ6 603 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 ZNF746Q6NUN9 644 aaPredicted RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 SWSAP1Q6NVH7 229 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 CCDC60Q8IWA6 550 aaPredicted RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 GIMAP8Q8ND71 665 aaPredicted RBP11.13□□□□□ -0.63
RTCB-201ENST00000216038 PIGOQ8TEQ8 1089 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 SH3TC2Q8TF17 1288 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 ANKRD7Q92527 254 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 SH2D3AQ9BRG2 576 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 GABBR1Q9UBS5 961 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 PCDHA10Q9Y5I2 948 aa11.13□□□□□ -0.63
RTCB-201ENST00000216038 GSTTP1A0A1W2PQM5 241 aa11.12□□□□□ -0.63
RTCB-201ENST00000216038 TMEM150BA6NC51 233 aa11.12□□□□□ -0.63
RTCB-201ENST00000216038 DYNC1LI2O43237 492 aaPredicted RBP11.12□□□□□ -0.63
RTCB-201ENST00000216038 ACTN4O43707 911 aaKnown RBP11.12□□□□□ -0.63
RTCB-201ENST00000216038 PTMAP06454 111 aaKnown RBP11.12□□□□□ -0.63
RTCB-201ENST00000216038 CYBAP13498 195 aa11.12□□□□□ -0.63
RTCB-201ENST00000216038 TCF7P36402 384 aaPredicted RBP11.12□□□□□ -0.63
RTCB-201ENST00000216038 AFMP43652 599 aa11.12□□□□□ -0.63
RTCB-201ENST00000216038 JAK3P52333 1124 aa11.12□□□□□ -0.63
RTCB-201ENST00000216038 E2F4Q16254 413 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms