RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 SHBGP04278 402 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 KRT13P13646 458 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 CHN1P15882 459 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 KCNH2Q12809 1159 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 ERFEQ4G0M1 354 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 CCDC63Q8NA47 563 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 RAD54LQ92698 747 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 CHMP6Q96FZ7 201 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 NOD2Q9HC29 1040 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 NR2E1Q9Y466 385 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 A0A1B0GUA9 196 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 MMP14P50281 582 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 PLCB4Q15147 1175 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 GJB7Q6PEY0 223 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 ANKS4BQ8N8V4 417 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 GLG1Q92896 1179 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 MLXIPLQ9NP71 852 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 KIF1CO43896 1103 aaKnown RBP21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 TRIM37O94972 964 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 HIBADHP31937 336 aaKnown RBP21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 ECM1Q16610 540 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 UBE2SQ16763 222 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 LRIG3Q6UXM1 1119 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 CCDC26Q8TAB7 109 aa21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 SH3RF3Q8TEJ3 882 aaPredicted RBP21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.92■■□□□ 1.1
PPP1R3F-201ENST00000055335 COL1A1P02452 1464 aaPredicted RBP21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 USP11P51784 963 aa21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 KCNQ4P56696 695 aa21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 TATDN2Q93075 761 aa21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 STK38LQ9Y2H1 464 aa21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 SNX24Q9Y343 169 aa21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 PVALEFA0A1B0GWK0 134 aa21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 GCFC2P16383 781 aaKnown RBP21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 FMO2Q99518 471 aa21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 RAB34Q9BZG1 259 aa21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 ZMYND12Q9H0C1 365 aa21.91■■□□□ 1.1
PPP1R3F-201ENST00000055335 DRP2Q13474 957 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 BYSLQ13895 437 aaKnown RBP21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 TMC3Q7Z5M5 1100 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 CADPS2Q86UW7 1296 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 DYDC1Q8WWB3 177 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 XPO6Q96QU8 1125 aaKnown RBP21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 NUCKS1Q9H1E3 243 aaKnown RBP21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 KIAA1024Q9UPX6 916 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 MTMR3Q13615 1198 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 LRRC14Q15048 493 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 CCDC25Q86WR0 208 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 NLRP3Q96P20 1036 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 PAGR1Q9BTK6 254 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 FER1L4A9Z1Z3 1794 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 TNS2Q63HR2 1409 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 DUOX1Q9NRD9 1551 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 CHRM1P11229 460 aaPredicted RBP21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 NR2F2P24468 414 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 UBE4AQ14139 1066 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 TXNRD3Q86VQ6 643 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 TIAM2Q8IVF5 1701 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 KSR1Q8IVT5 923 aa21.9■■□□□ 1.1
PPP1R3F-201ENST00000055335 CRKLP46109 303 aaKnown RBP21.89■■□□□ 1.1
PPP1R3F-201ENST00000055335 ELF3P78545 371 aaPredicted RBP21.89■■□□□ 1.1
PPP1R3F-201ENST00000055335 CCDC50Q8IVM0 306 aa21.89■■□□□ 1.1
PPP1R3F-201ENST00000055335 NSMCE1Q8WV22 266 aa21.89■■□□□ 1.1
PPP1R3F-201ENST00000055335 PRMT1Q99873 361 aaKnown RBP21.89■■□□□ 1.1
PPP1R3F-201ENST00000055335 GPCPD1Q9NPB8 672 aa21.89■■□□□ 1.1
PPP1R3F-201ENST00000055335 RIC8AQ9NPQ8 531 aa21.89■■□□□ 1.1
PPP1R3F-201ENST00000055335 SAMD15Q9P1V8 674 aa21.89■■□□□ 1.1
PPP1R3F-201ENST00000055335 GALNT17Q6IS24 598 aa21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 RSRC1Q96IZ7 334 aaKnown RBP21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 AZI2Q9H6S1 392 aa21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 OSGEPQ9NPF4 335 aa21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 BTG4Q9NY30 223 aa21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 F8W031 263 aaPredicted RBP21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 DRD4P21917 467 aa21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 SLC8A1P32418 973 aa21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 OTUD6AQ7L8S5 288 aa21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 LRRC34Q8IZ02 419 aa21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 SCFD2Q8WU76 684 aa21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 PBKQ96KB5 322 aa21.89■■□□□ 1.09
PPP1R3F-201ENST00000055335 F8VZ95 297 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 RBAK-RBAKDNI3L0D1 243 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 ATP6V1G2O95670 118 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 IFI35P80217 286 aaPredicted RBP21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 C12orf60Q5U649 245 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 KIF2BQ8N4N8 673 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 CCT6BQ92526 530 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 MTFR1LQ9H019 292 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 STK17AQ9UEE5 414 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 NAGPAQ9UK23 515 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 CCT8L1PA6NM43 557 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 TMEM110-MUSTN1A8MSY1 372 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 CLGNO14967 610 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 WLSQ5T9L3 541 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 NAIF1Q69YI7 327 aaPredicted RBP21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 GPBP1Q86WP2 473 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 INTS9Q9NV88 658 aaKnown RBP21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 SWAP70Q9UH65 585 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 SRCAPQ6ZRS2 3230 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 ZNF804BA4D1E1 1349 aa21.88■■□□□ 1.09
PPP1R3F-201ENST00000055335 GFPT2O94808 682 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms