RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 REEP2Q9BRK0 252 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 PKD2L1Q9P0L9 805 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.47□□□□□ -0.09
CTNS-201ENST00000046640 NCK2O43639 380 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 MYBP10242 640 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 POLD1P28340 1107 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 SLC12A3P55017 1021 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 SPIRE1Q08AE8 756 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 ZCWPW2Q504Y3 356 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 COBLL1Q53SF7 1204 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 WDR93Q6P2C0 686 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 CCDC170Q8IYT3 715 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 COG1Q8WTW3 980 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 SELENOOQ9BVL4 669 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 GLIS2Q9BZE0 524 aaPredicted RBP14.47□□□□□ -0.09
CTNS-201ENST00000046640 TMEM39BQ9GZU3 492 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 FBXO28Q9NVF7 368 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 SALL4Q9UJQ4 1053 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 DNM3Q9UQ16 869 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 PCDHA2Q9Y5H9 948 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 ACTN1P12814 892 aa14.46□□□□□ -0.09
CTNS-201ENST00000046640 EPS15P42566 896 aa14.46□□□□□ -0.09
CTNS-201ENST00000046640 VAV2P52735 878 aa14.46□□□□□ -0.09
CTNS-201ENST00000046640 SND1Q7KZF4 910 aaKnown RBP eCLIP14.46□□□□□ -0.09
CTNS-201ENST00000046640 KSR1Q8IVT5 923 aa14.46□□□□□ -0.09
CTNS-201ENST00000046640 TPH2Q8IWU9 490 aa14.46□□□□□ -0.09
CTNS-201ENST00000046640 SLFN12Q8IYM2 578 aa14.46□□□□□ -0.09
CTNS-201ENST00000046640 BAP1Q92560 729 aa14.46□□□□□ -0.09
CTNS-201ENST00000046640 CNKSR1Q969H4 720 aa14.46□□□□□ -0.09
CTNS-201ENST00000046640 NRXN2Q9P2S2 1712 aa14.46□□□□□ -0.09
CTNS-201ENST00000046640 CLIC2O15247 247 aa14.46□□□□□ -0.1
CTNS-201ENST00000046640 IVLP07476 585 aa14.46□□□□□ -0.1
CTNS-201ENST00000046640 NR2F2P24468 414 aa14.46□□□□□ -0.1
CTNS-201ENST00000046640 GIT2Q14161 759 aa14.46□□□□□ -0.1
CTNS-201ENST00000046640 STYK1Q6J9G0 422 aa14.46□□□□□ -0.1
CTNS-201ENST00000046640 LRRC1Q9BTT6 524 aa14.46□□□□□ -0.1
CTNS-201ENST00000046640 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.46□□□□□ -0.1
CTNS-201ENST00000046640 A0A1W2PQJ5 194 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 MAGEA1P43355 309 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 RNASE9P60153 205 aaKnown RBP14.45□□□□□ -0.1
CTNS-201ENST00000046640 RAPGEF1Q13905 1077 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 HAUS3Q68CZ6 603 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 NFRKBQ6P4R8 1299 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 C7orf43Q8WVR3 580 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 RUSC1Q9BVN2 902 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 DMGDHQ9UI17 866 aaKnown RBP14.45□□□□□ -0.1
CTNS-201ENST00000046640 DDX39AO00148 427 aaKnown RBP14.45□□□□□ -0.1
CTNS-201ENST00000046640 STAT2P52630 851 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 AP3B2Q13367 1082 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 PTPROQ16827 1216 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 MAP9Q49MG5 647 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 DCAF17Q5H9S7 520 aaPredicted RBP14.45□□□□□ -0.1
CTNS-201ENST00000046640 TCERG1LQ5VWI1 586 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 GMCL1P1Q8NEA9 526 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 GMCL1Q96IK5 515 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 TMOD2Q9NZR1 351 aa14.45□□□□□ -0.1
CTNS-201ENST00000046640 CYP3A7-CYP3A51PA0A087WV96 503 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 NOL4O94818 638 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 CYP3A7P24462 503 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 TUBB4BP68371 445 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 HDLBPQ00341 1268 aaKnown RBP14.44□□□□□ -0.1
CTNS-201ENST00000046640 FIGNQ5HY92 759 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 HYIQ5T013 277 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 PAPD7Q5XG87 772 aaKnown RBP14.44□□□□□ -0.1
CTNS-201ENST00000046640 LARGE2Q8N3Y3 721 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 CRYGNQ8WXF5 182 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 GLT8D2Q9H1C3 349 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 KCTD10Q9H3F6 313 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 MED4Q9NPJ6 270 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 SIPA1L1O43166 1804 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 TLR2O60603 784 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 USO1O60763 962 aaKnown RBP14.44□□□□□ -0.1
CTNS-201ENST00000046640 SREBF1P36956 1147 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 DLGAP5Q15398 846 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 PDXDC1Q6P996 788 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 FAM133AQ8N9E0 248 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 ERMNQ8TAM6 284 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 EIF2AK1Q9BQI3 630 aaKnown RBP14.44□□□□□ -0.1
CTNS-201ENST00000046640 MRIQ9BWK5 157 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 GCNT3O95395 438 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 SLC9A1P19634 815 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 CKAP4Q07065 602 aaKnown RBP14.44□□□□□ -0.1
CTNS-201ENST00000046640 KCNH2Q12809 1159 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 DGKZQ13574 1117 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 CCNI2Q6ZMN8 369 aaPredicted RBP14.44□□□□□ -0.1
CTNS-201ENST00000046640 MAEAQ7L5Y9 396 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 NAP1L4Q99733 375 aaKnown RBP14.44□□□□□ -0.1
CTNS-201ENST00000046640 WDR18Q9BV38 432 aa14.44□□□□□ -0.1
CTNS-201ENST00000046640 ARFGEF1Q9Y6D6 1849 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 RPA1P27694 616 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 HOXD13P35453 343 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 CASP4P49662 377 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 PLS1Q14651 629 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
CTNS-201ENST00000046640 PCDHB13Q9Y5F0 798 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 SHTN1A0MZ66 631 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 GOLGA6BA6NDN3 693 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 SPDYE2BA6NHP3 402 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 AGPSO00116 658 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 CETN3O15182 167 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms