RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 EIF2AK2P19525 551 aaKnown RBP15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 IREB2P48200 963 aaKnown RBP15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 TBC1D8BQ0IIM8 1120 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 ITGB3BPQ13352 177 aaPredicted RBP15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 DPY19L2Q6NUT2 758 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 NSMFQ6X4W1 530 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 MYRIPQ8NFW9 859 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 ABHD10Q9NUJ1 306 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 SEL1LQ9UBV2 794 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 CAPN11Q9UMQ6 739 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 TRAF3IP3Q9Y228 551 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 TBCAO75347 108 aaKnown RBP15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 P4HBP07237 508 aaKnown RBP15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 GUCY2CP25092 1073 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 CCND2P30279 289 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 GTF2F1P35269 517 aaKnown RBP eCLIP15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 ZNF131P52739 623 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 VWA3BQ502W6 1294 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 FKBP15Q5T1M5 1219 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 ARHGEF16Q5VV41 709 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 MIER3Q7Z3K6 550 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 SFR1Q86XK3 245 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 TMTC1Q8IUR5 882 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 REXO1L1PQ8IX06 675 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 RDM1Q8NG50 284 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 GPRASP2Q96D09 838 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 ZFP91Q96JP5 570 aaPredicted RBP15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 LXNQ9BS40 222 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 TTYH3Q9C0H2 523 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 ACAD9Q9H845 621 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 WRAP73Q9P2S5 460 aaPredicted RBP15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 ODF2LQ9ULJ1 636 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 PPP2R2CQ9Y2T4 447 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 LOC285556D6RIA3 1793 aa15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 COL11A1P12107 1806 aaPredicted RBP15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 LOXHD1Q8IVV2 1947 aa15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 STAM2O75886 525 aa15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 PPATQ06203 517 aa15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 CHST13Q8NET6 341 aa15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 NSUN6Q8TEA1 469 aaKnown RBP15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 PIGOQ8TEQ8 1089 aa15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 CPLX3Q8WVH0 158 aa15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 INPP4AQ96PE3 977 aaPredicted RBP15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 DNAJC7Q99615 494 aa15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 ZSWIM4Q9H7M6 989 aa15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 TBC1D7Q9P0N9 293 aa15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 DBR1Q9UK59 544 aaKnown RBP15.84■□□□□ 0.13
RTFDC1-201ENST00000023939 A0A1W2PQJ5 194 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 TTC26A0AVF1 554 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 RNF225M0QZC1 329 aaPredicted RBP15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 PDXKO00764 312 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 CXCL11O14625 94 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 EIF3DO15371 548 aaKnown RBP eCLIP15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 NR3C2P08235 984 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 SFNP31947 248 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 KRT9P35527 623 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 JAK3P52333 1124 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 KRT76Q01546 638 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 RAD51AP2Q09MP3 1159 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 PRKG1Q13976 671 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 KNOP1Q1ED39 458 aaKnown RBP15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 PROCA1Q8NCQ7 364 aaPredicted RBP15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 OR8K1Q8NGG5 319 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 SENP7Q9BQF6 1050 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 NDST4Q9H3R1 872 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 ZHX3Q9H4I2 956 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 OTOFQ9HC10 1997 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 CYP39A1Q9NYL5 469 aa15.83■□□□□ 0.13
RTFDC1-201ENST00000023939 A0A0G2JMZ2 1700 aa15.83■□□□□ 0.12
RTFDC1-201ENST00000023939 UBE4BO95155 1302 aa15.83■□□□□ 0.12
RTFDC1-201ENST00000023939 TRAF5O00463 557 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 NF2P35240 595 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 CASP5P51878 434 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 SYCP1Q15431 976 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 LBX2Q6XYB7 198 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 NLRX1Q86UT6 975 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 ERO1BQ86YB8 467 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 EEF2KMTQ96G04 330 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 LUC7L2Q9Y383 392 aaKnown RBP15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 PTPRFP10586 1907 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 A0A0G2JLL6 359 aaPredicted RBP15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 RASSF10A6NK89 507 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 RSPH10B2B2RC85 870 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 FAM13AO94988 1023 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 RSPH10BP0C881 870 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 MYCLP12524 364 aaPredicted RBP15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 HOXD13P35453 343 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 QARSP47897 775 aaKnown RBP15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 NFIL3Q16649 462 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 CYP26C1Q6V0L0 522 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 RAD9BQ6WBX8 426 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 TOGARAM2Q6ZUX3 1019 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 PRRT2Q7Z6L0 340 aaPredicted RBP15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 NELFCDQ8IXH7 590 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 ANKRD13AQ8IZ07 590 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 KIF18AQ8NI77 898 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 CDCA5Q96FF9 252 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 PARVGQ9HBI0 331 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 A1CFQ9NQ94 594 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms