RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Ddx21Q9JIK5 851 aaKnown RBP9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Scn5aQ9JJV9 2019 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Irgm2A0A140LIF8 407 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 AlyrefO08583 255 aaKnown RBP9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Adra2bP30545 450 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Nedd1P33215 660 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Tap2P36371 702 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 TdgP56581 421 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Hoxb13P70321 286 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ly9Q01965 654 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Nhlh1Q02576 133 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Dennd1bQ3U1T9 766 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Tmtc2Q56A06 836 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Igf2bp2Q5SF07 592 aaKnown RBP9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Elavl4Q61701 385 aaKnown RBP9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Tmem59lQ7TNI2 337 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Zmym6Q8BS54 1249 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Nrip1Q8CBD1 1161 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Wdr11Q8K1X1 1223 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 B3galt6Q91Z92 325 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Mfsd5Q921Y4 450 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Q9DAQ4 598 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Tmod3Q9JHJ0 352 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Myh9Q8VDD5 1960 aaKnown RBP9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Nup210lQ9D2F7 1881 aa9.22□□□□□ -0.93
Trim40-203ENSMUST00000172711 Wfdc11A2A5H7 82 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Arhgef26D3YYY8 869 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 TazI7HJS2 263 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gm10436L7N1Y3 520 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Timm44O35857 452 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Pgk1P09411 417 aaKnown RBP9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 ArP19091 899 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Lta4hP24527 611 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Psen1P49769 467 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Il1rapl1P59823 695 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gbp1Q01514 589 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Echdc2Q3TLP5 296 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Xxylt1Q3U4G3 392 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Plekha7Q3UIL6 1118 aaKnown RBP9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 ErmnQ5EBJ4 281 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 MycbpapQ5SUV2 932 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Alkbh8Q80Y20 664 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Fam49aQ8BHZ0 323 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Cep55Q8BT07 462 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Dhx32Q8BZS9 744 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 SltmQ8CH25 1031 aaKnown RBP9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Vwa1Q8R2Z5 415 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ces1Q8VCC2 565 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Olfr397Q8VEZ6 315 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Anapc4Q91W96 807 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Rpap3Q9D706 660 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Kcnh7Q9ER47 1195 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Asah2Q9JHE3 756 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 AllcQ9JHX6 414 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Nek4Q9Z1J2 792 aa9.21□□□□□ -0.93
Trim40-203ENSMUST00000172711 Dsg3O35902 993 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 GlulP15105 373 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 FasP25446 327 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Cyp17a1P27786 507 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Tulp2P46686 562 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Exosc10P56960 887 aaKnown RBP9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Ctnnb1Q02248 781 aaKnown RBP9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Rhpn1Q61085 643 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Gprc5aQ8BHL4 356 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Znf689Q8BKK5 500 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 RadxQ8C779 850 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Vopp1Q8R1C3 172 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Lzts2Q91YU6 671 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Nrbp1Q99J45 535 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Lmbr1Q9JIT0 490 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 JmyQ9QXM1 983 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Cnpy2Q9QXT0 182 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Ubxn8Q9QZ49 277 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Ly6g6dQ9Z1Q3 135 aa9.21□□□□□ -0.94
Trim40-203ENSMUST00000172711 Igkv18-36A0A075B5M9 114 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Rgs2O08849 211 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Cyp26a1O55127 497 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Cyp21P03940 487 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 GnaqP21279 359 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Gfpt1P47856 697 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Actr2P61161 394 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Etv6P97360 485 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 SPINDOCQ05AH6 381 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Mfhas1Q3V1N1 1048 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 PRAG1Q571I4 1179 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Galnt17Q7TT15 598 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Azin2Q8BVM4 459 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Gpc5Q8CAL5 572 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Cdan1Q8CC12 1239 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Ago4Q8CJF8 861 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Kri1Q8VDQ9 704 aaKnown RBP9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Plcb4Q91UZ1 1175 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Gpr108Q91WD0 569 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Mageb3Q9D2H4 330 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 TheglQ9DA15 459 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Nlrp5Q9R1M5 1163 aa9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Mbd3Q9Z2D8 285 aaKnown RBP9.2□□□□□ -0.94
Trim40-203ENSMUST00000172711 Fam209A2APA5 170 aa9.19□□□□□ -0.94
Trim40-203ENSMUST00000172711 Xpnpep3B7ZMP1 506 aaKnown RBP9.19□□□□□ -0.94
Trim40-203ENSMUST00000172711 Cyp2b23E9Q593 491 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms