RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Znf131Q8K3J5 619 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Prpf6Q91YR7 941 aaKnown RBP17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Fsip1Q9D3V5 435 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Tmx2Q9D710 295 aaKnown RBP17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Dpp7Q9ET22 506 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Ess2O70279 479 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 MycnP03966 462 aaKnown RBP17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Pth1rP41593 591 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Meis3P97368 378 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Lmntd2Q0VET5 664 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Znf827Q505G8 1078 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Znf652Q5DU09 608 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Tpm4Q6IRU2 248 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Traf3ip3Q8C0G2 513 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Epc2Q8C0I4 808 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Rcor2Q8C796 523 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Aldh1b1Q9CZS1 519 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Q9D5Q8 446 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Tpcn1Q9EQJ0 817 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Oog1E9Q5G7 496 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Serpina1aP07758 413 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Serpina1bP22599 413 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Serpina1cQ00896 412 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Serpina1dQ00897 413 aa17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 Eef1gQ9D8N0 437 aaKnown RBP17.5■□□□□ 0.39
Trim39-203ENSMUST00000113706 PurbO35295 324 aaKnown RBP17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Pabpc4Q6PHQ9 660 aaKnown RBP17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Rhbdf1Q6PIX5 856 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Rab11fip4Q8BQP8 635 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Enox2Q8R0Z2 598 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Lpin2Q99PI5 893 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Vta1Q9CR26 309 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Ribc1Q9D0B8 379 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Arhgef7Q9ES28 862 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 DexiQ9WUQ7 95 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Idh1O88844 414 aaKnown RBP17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Rgl2Q61193 778 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Zfp91Q62511 572 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Gpd2Q64521 727 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Dhx37Q6NZL1 1150 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Cdc23Q8BGZ4 597 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Fam53cQ8BXQ8 393 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Atp1a1Q8VDN2 1023 aaKnown RBP17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Rrp1bQ91YK2 724 aaKnown RBP17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Bco2Q99NF1 532 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Zranb2Q9R020 330 aaKnown RBP17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Pex11aQ9Z211 246 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Ttc38A3KMP2 465 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Ace3D0G895 737 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Gcom1E9PZ54 550 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 MyzapQ3UIJ9 466 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Vwa3aQ3UVV9 1148 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Sema4bQ62179 823 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Ctdp1Q7TSG2 960 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Adcy3Q8VHH7 1145 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Slc12a8Q8VI23 705 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Spdl1Q923A2 608 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 Smtnl1Q99LM3 459 aa17.49■□□□□ 0.39
Trim39-203ENSMUST00000113706 JcadQ5DTX6 1320 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Gm4907B1AXB9 411 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 MyocO70624 490 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Krt9Q6RHW0 743 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Cnksr2Q80YA9 1032 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Spata32Q8C5V0 334 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Sash3Q8K352 380 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Myh11O08638 1972 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 UtrnE9Q6R7 3430 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Pcdh15Q99PJ1 1943 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Gm10436L7N1Y3 520 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Atp9aO70228 1047 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Cd68P31996 326 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Nr2f2P43135 414 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Neurl1bQ0MW30 546 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Mier3Q3UHF3 551 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Cacna2d4Q5RJF7 1116 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Dcaf15Q6PFH3 600 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Drc7Q6V3W6 876 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Ccdc89Q9DA73 370 aa17.48■□□□□ 0.39
Trim39-203ENSMUST00000113706 Gm44503E9PYU5 387 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Nmt1O70310 496 aaKnown RBP17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Stim2P83093 746 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Fgfr4Q03142 799 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Raver2Q7TPD6 673 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Tmco3Q8BH01 678 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Serpinb13Q8CDC0 389 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Rassf3Q99P51 232 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Lrrc38A2VDH3 298 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 TazI7HJS2 263 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Ano9P86044 747 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Pla2g6P97819 807 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Snd1Q78PY7 910 aaKnown RBP17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Rhobtb2Q91V93 728 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Apol6B7ZC55 329 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Fgd3O88842 733 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Gna14P30677 355 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Ifnar1P33896 590 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Mcm5P49718 733 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Hps5P59438 1126 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Sox10Q04888 466 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 Fam20aQ8CID3 541 aa17.47■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms