RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Dtnbp1Q91WZ8 352 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 EpgnQ924X1 152 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 EcsitQ9QZH6 435 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Ulk4Q3V129 1303 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Sstr3P30935 428 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Krt80Q0VBK2 452 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Sec31aQ3UPL0 1230 aaKnown RBP16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Clec4gQ8BNX1 294 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Slc35g1Q8BY79 368 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Inpp5fQ8CDA1 1132 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Adprhl2Q8CG72 370 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Kdm5aQ3UXZ9 1690 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 A630010A05RikA9C473 232 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Acad12D3Z7X0 555 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Krt10P02535 570 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Skap2Q3UND0 358 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Ncoa4Q5U4H9 625 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Cyp7b1Q60991 507 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 SybuQ8BHS8 665 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Stxbp5Q8K400 1152 aaKnown RBP16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Hdac11Q91WA3 347 aa16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 AatfQ9JKX4 526 aaKnown RBP16.79■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Lig1P37913 916 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Tac1P41539 130 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Atp5c1Q91VR2 298 aaKnown RBP16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Pramef12Q9D2F1 463 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Ccdc194A0A140LIT1 234 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Eno3P21550 434 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Trmt10cQ3UFY8 414 aaKnown RBP16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Trim52Q8CDV4 233 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Rpap2Q8VC34 614 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Gstt4Q9D4P7 240 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Gins2Q9D600 185 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Tex9Q9D845 387 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Rtl9Q32KG4 1339 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 1700016G14RikA0A286YCZ6 238 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 DgkkE9Q7N4 1118 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Lins1Q3U1D0 764 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Ppp1r16bQ8VHQ3 568 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Rpa3Q9CQ71 121 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 1700013H16RikQ9DAC5 291 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Orc1Q9Z1N2 840 aaKnown RBP16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Phldb3E9QAF4 648 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Mylk3Q3UIZ8 795 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 CsadQ9DBE0 493 aa16.78■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Olfr552E9Q545 317 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Vmn2r78K7N6U5 853 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Tph1P17532 447 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Apol7eQ3UZ24 369 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Slc9a1Q61165 820 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Ccdc154Q6RUT8 657 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Hpcal4Q8BGZ1 191 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Trim35Q8C006 501 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Terb1Q8C0V1 768 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Uap1Q91YN5 522 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 SmtnQ921U8 923 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Tnfrsf10bQ9QZM4 381 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Pdcd7Q9WTY1 482 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Gadd45gQ9Z111 159 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Tcp11x2A2AEI7 503 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Tcp10bE9PYJ0 438 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Gtpbp6Q3U6U5 514 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 LbrQ3U9G9 626 aaKnown RBP16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Vav2Q60992 868 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Pcdhb14Q6PB90 796 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Serpinb3bQ9D1Q5 387 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Pdha1P35486 390 aaKnown RBP16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Rasgrf2P70392 1189 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Ext2P70428 718 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Dhx40Q6PE54 779 aaKnown RBP16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Usp44Q8C2S0 711 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Akr1c14Q91WT7 323 aa16.77■□□□□ 0.28
Ubr2-201ENSMUST00000113335 Myo3bQ1EG27 1305 aa16.77■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Rgs3Q9DC04 966 aa16.77■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Morf4l2Q9R0Q4 288 aa16.77■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Slc8a3S4R2P9 928 aa16.77■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Uggt2E9Q4X2 1504 aa16.77■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Phactr3Q8BYK5 558 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Syngap1F6SEU4 1340 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Clasp1Q80TV8 1535 aaKnown RBP16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Gnl1P36916 607 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Sin3bQ62141 1098 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Champ1Q8K327 802 aaKnown RBP16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 AlkP97793 1621 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 GabrdP22933 449 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Xxylt1Q3U4G3 392 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Trim38Q5SZ99 471 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Tmem179Q8BHH9 233 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Zcrb1Q9CZ96 217 aaKnown RBP16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Serpina9Q9D7D2 418 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Eddm13E9Q7F5 164 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Cyp4f40G3UW81 524 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Gm3402K7N5P2 326 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Parp3Q3ULW8 533 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Pfdn4Q3UWL8 134 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Rsad1Q5SUV1 442 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Serpinb6Q60854 378 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Irak1Q62406 710 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Ppp2r2aQ6P1F6 447 aa16.76■□□□□ 0.27
Ubr2-201ENSMUST00000113335 Tulp1Q9Z273 543 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms