RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Gpr39Q5U431 456 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 MafkQ61827 156 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Scaf4Q6PFF0 1209 aaKnown RBP9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Pnpla2Q8BJ56 486 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Scara5Q8K299 491 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Cpxm2Q9D2L5 764 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Pde7bQ9QXQ1 446 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Magel2Q9QZ04 1284 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Vps8Q0P5W1 1427 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Prdm2A2A7B5 1709 aaKnown RBP9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Vmn1r167G3UW71 315 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Spsb2O88838 264 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Me1P06801 572 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Stra8P70278 393 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 InhaQ04997 366 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Kctd1Q5M956 257 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Ctc1Q5SUQ9 1212 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Specc1Q5SXY1 1067 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 CpQ61147 1061 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Rxfp1Q6R6I7 758 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Acsm2Q8K0L3 575 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Mms19Q9D071 1031 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Zbp1Q9QY24 411 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Ambra1A2AH22 1300 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Bcl9Q9D219 1425 aa9.22□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Med14A2ABV5 1459 aaKnown RBP9.21□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Gm43951A0A0N4SUT6 962 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Bcat2O35855 393 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 B3galt1O54904 326 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Atp2a2O55143 1044 aaKnown RBP9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Glb1P23780 647 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Cdkn1cP49919 348 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Ephb4P54761 987 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Gdpd4Q3TT99 632 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Esrp1Q3US41 680 aaKnown RBP9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Afap1l2Q5DTU0 825 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Grm7Q68ED2 915 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Gm21093Q6GQS8 569 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Jade3Q6IE82 823 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Mpp4Q6P7F1 635 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 SnupnQ80W37 358 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Cep128Q8BI22 1102 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 PolrmtQ8BKF1 1207 aaKnown RBP9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Slc9a7Q8BLV3 726 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Adamts4Q8BNJ2 833 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Klk13Q8CGR6 276 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Sh3d19Q91X43 789 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Rbm10Q99KG3 930 aaKnown RBP9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Saal1Q9D2C2 474 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 TsaccQ9DA44 124 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Cd320Q9Z1P5 260 aa9.21□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Morc3F7BJB9 942 aaKnown RBP9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 NfibP97863 570 aaKnown RBP9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 H2-T22Q31615 379 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Trappc10Q3TLI0 1259 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 AtminQ6P9S1 818 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Trpm4Q7TN37 1213 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Wdr24Q8CFJ9 790 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Col23a1Q8K4G2 532 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 KlbQ99N32 1043 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Arl13aQ9D416 372 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 MicalclQ9D5U9 680 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Gtf2h2Q9JIB4 396 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Adam17Q9Z0F8 827 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Akap12Q9WTQ5 1684 aa9.2□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Gm3248K7N721 186 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Cd59aO55186 123 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Mtco1P00397 514 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Mc1rQ01727 315 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Mex3dQ3UE17 643 aaKnown RBP9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Oxr1Q4KMM3 866 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 PRAG1Q571I4 1179 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Mak16Q8BGS0 296 aaKnown RBP9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Ubr7Q8BU04 425 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Kctd12bQ8C7J6 292 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Epn2Q8CHU3 595 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Ces1fQ91WU0 561 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Pip4k2cQ91XU3 421 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Cbll1Q9JIY2 491 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Ak2Q9WTP6 239 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Abcc6Q9R1S7 1498 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 AlkP97793 1621 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Phlpp1Q8CHE4 1687 aa9.19□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Naaladl2A0A0N4SUJ3 795 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Tnfrsf25B1AWN9 411 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Yjefn3F6W8I0 251 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 C130060K24RikG3UWA8 416 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Ap1b1O35643 943 aaKnown RBP9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Zfy1P10925 782 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 RelbQ04863 558 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Cnnm2Q3TWN3 875 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Rnf220Q6PDX6 566 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 HpseQ6YGZ1 535 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Ric8bQ80XE1 520 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Il17reQ8BH06 637 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Dip2aQ8BWT5 1523 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Tmem259Q8CIV2 574 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Prkd3Q8K1Y2 889 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 LipmQ8K2A6 422 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Vps16Q920Q4 839 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms