RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Prpf31Q8CCF0 499 aaKnown RBP10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Pex19Q8VCI5 299 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 EpgnQ924X1 152 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ccne2Q9Z238 404 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Crlf3Q9Z2L7 442 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ms4a2P20490 235 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Irf5P56477 497 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 BcrQ6PAJ1 1270 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ccdc65Q8VHI7 493 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ugt1a6bK9J7B2 531 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Casp8O89110 480 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ddx3yQ62095 658 aaKnown RBP10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ugt1a6Q64435 531 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ugt1a7cQ6ZQM8 531 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Usp54Q8BL06 1588 aaKnown RBP10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 CgasQ8C6L5 507 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Arl6ip4Q9JM93 229 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm7168A0AUV4 508 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Vmn2r23E9PXI5 849 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ckap2lQ7TS74 745 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Tada3Q8R0L9 432 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rpap2Q8VC34 614 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Fgd4Q91ZT5 766 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Nos1Q9Z0J4 1429 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rgs22G3UYX5 1258 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 InhbeO08717 350 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cfap52Q5F201 620 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cage1Q5IR70 849 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Itih3Q61704 889 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Krt32Q62168 407 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Susd4Q8BH32 490 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Fra10ac1Q8BP78 315 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 4932411N23RikQ8C0S0 470 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cog4Q8R1U1 785 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rrp1bQ91YK2 724 aaKnown RBP10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ttc13A0A1L1SSC7 844 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Krt36B1AQ75 473 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Nmt2O70311 529 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Q3KNL4 93 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Tmem63cQ8CBX0 802 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gnl3Q8CI11 538 aaKnown RBP10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ccdc92Q8VDN4 314 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Calr3Q9D9Q6 380 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Atp10aO54827 1508 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Kcnh2O35219 1162 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 IkbkbO88351 757 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Irak1Q62406 710 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Dhx40Q6PE54 779 aaKnown RBP10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Proser2Q8C5R2 471 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Vmn2r79E9Q067 851 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm3127E9Q9P5 263 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm3453K7N724 263 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Sstr3P30935 428 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Sin3bQ62141 1098 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rfx6Q8C7R7 927 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ndufb9Q9CQJ8 179 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cnot8Q9D8X5 292 aa10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Abt1Q9QYL7 269 aaKnown RBP10.56□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rgs12Q8CGE9 1381 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gbp10Q000W5 611 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Acbd5Q5XG73 508 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Churc1Q6DG52 112 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Fam196bQ6GQV1 535 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Usp8Q80U87 1080 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Smim5Q8BT42 78 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Syt2P46097 422 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm3414Q3TNU4 584 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rsad1Q5SUV1 442 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Fbxo18Q8K2I9 1042 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Trim16Q99PP9 556 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Tnfrsf10bQ9QZM4 381 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Zranb2Q9R020 330 aaKnown RBP10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ulk4Q3V129 1303 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rims1Q99NE5 1463 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm382B1AXN3 1250 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Kpna2P52293 529 aaKnown RBP10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Usp50Q6P8X6 390 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Fnbp1Q80TY0 616 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 P3h4Q8K2B0 443 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Trpd52l3Q9CQ14 231 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rpa3Q9CQ71 121 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Tulp1Q9Z273 543 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Myo3bQ1EG27 1305 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 SelenovD3YXG1 328 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cyp4f40G3UW81 524 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Myl1P05977 188 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Pim2Q62070 370 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 MtbpQ8BJS8 894 aaKnown RBP10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 MbipQ99LQ1 341 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Serpinb3bQ9D1Q5 387 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 AatfQ9JKX4 526 aaKnown RBP10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 EcsitQ9QZH6 435 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Wdr46Q9Z0H1 622 aaKnown RBP10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm43738A0A0G2JEA5 862 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Klhl34A2AI76 644 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Pfkfb3A7UAK5 555 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Zmym1Q3TJB1 983 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Mylk3Q3UIZ8 795 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Impg2Q80XH2 1243 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Llgl1Q80Y17 1036 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms