RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Bud13Q8R149 637 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Alpk1Q9CXB8 1231 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Pabpc1lA2A5N3 607 aaKnown RBP12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ces1aE9PYP1 563 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Chil3O35744 398 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Kif5aP33175 1027 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Snap25P60879 206 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gspt2Q149F3 632 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm5592Q3V0A6 857 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Birc2Q62210 612 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Naif1Q6PFD7 327 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ints8Q80V86 995 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 IntS13Q8QZV7 732 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 MlphQ91V27 590 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 4930519G04RikQ9CPT7 205 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Klra10Q9R1G6 266 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Mmrn1B2RPV6 1210 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Sik1Q60670 779 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ccdc189Q6NZQ0 333 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 ParnQ8VDG3 624 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 RtcbQ99LF4 505 aaKnown RBP12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 March8Q9DBD2 286 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Nid2O88322 1403 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm14525B1AZA0 212 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm2012B1B0R1 212 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Taf4bG5E8Z2 855 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Pdha1P35486 390 aaKnown RBP12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Setd4P58467 439 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Siah1aP61092 282 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm14819Q62478 212 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Xpo6Q924Z6 1125 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Tmem191cQ9JJB1 302 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Cfap70D3YVL2 1141 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm10488Q4KL05 212 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Taok1Q5F2E8 1001 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Nsrp1Q5NCR9 542 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Tbc1d9bQ5SVR0 1263 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Swap70Q6A028 585 aaKnown RBP12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 WhrnQ80VW5 918 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Znf830Q8R1N0 363 aaKnown RBP12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Nlrp5Q9R1M5 1163 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Col16a1Q8BLX7 1580 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Dnaaf5B9EJR8 853 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Sclt1G5E861 688 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 PurbO35295 324 aaKnown RBP12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gbp1Q01514 589 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Mettl25Q6NXH8 597 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Slc9b1Q8C0X2 565 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Taco1Q8K0Z7 294 aaKnown RBP12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 PlekQ9JHK5 350 aaKnown RBP12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Pcdh11xF6ZNL5 1338 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Osbpl9A2A8Z1 736 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Stk10O55098 966 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Aimp1P31230 310 aaKnown RBP12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Pkn1P70268 946 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 G3bp2P97379 482 aaKnown RBP12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 TchpQ3TVW5 497 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 RilpQ5ND29 369 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Acad11Q80XL6 779 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 BC048507Q80ZS7 89 aa12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Nop56Q9D6Z1 580 aaKnown RBP12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Noc2lQ9WV70 747 aaKnown RBP12.29□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm28360A0A087WR25 190 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ttc38A3KMP2 465 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Vmn2r78K7N6U5 853 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Stmn4P63042 189 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ddb1Q3U1J4 1140 aaKnown RBP12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ubxn6Q99PL6 442 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Nup62clA2AG10 272 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Lrch1P62046 709 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 B4galnt4Q766D5 1034 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Dpp8Q80YA7 892 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Zdhhc14Q8BQQ1 489 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Dnm1lQ8K1M6 742 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Tjp2Q9Z0U1 1167 aaKnown RBP12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Tnni3kQ5GIG6 834 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 TbcbQ9D1E6 244 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Lrrc57Q9D1G5 239 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Znf287Q9EQB9 759 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gbp2Q9Z0E6 589 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm15262A0A140LIQ5 728 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 GmncQ3URY2 333 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ttf2Q5NC05 1138 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Brd2Q7JJ13 798 aaKnown RBP12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Cfap36Q8C6E0 343 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Cib2Q9Z309 187 aa12.28□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Vmn2r79E9Q067 851 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Lig1P37913 916 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Slc10a4Q3UEZ8 437 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Rcn2Q8BP92 320 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ccdc113Q8C5T8 377 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Zfp449Q8CB76 518 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Pym1Q8CHP5 203 aaKnown RBP12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Kremen1Q99N43 473 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Robo1O89026 1612 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm5936A2BG95 728 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm5640A3KG49 728 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Xrcc5P27641 732 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Nol4P60954 483 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Spout1Q3UHX9 385 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms