RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Gm6588E9Q3K0 461 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 PrimpolQ6P1E7 537 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Spata17Q9D552 379 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Syngap1F6SEU4 1340 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Ttc38A3KMP2 465 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Stag2O35638 1231 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Grin1P35438 938 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Arid3aQ62431 601 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Gm5622Q810Q0 167 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Coa7Q921H9 231 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Krt5Q922U2 580 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Ddx24Q9ESV0 857 aaKnown RBP19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Mrps31Q61733 384 aaKnown RBP19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Lrrc14Q8VC16 493 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Grin3bQ91ZU9 1003 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Lrriq4A6H6A4 596 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 JrklB2RRL2 523 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Ugt1a8D3Z748 530 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Ugt1a10E9PXN7 530 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Fam183bQ5NC57 135 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Jade1Q6ZPI0 834 aaKnown RBP19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 AmphQ7TQF7 686 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Rpap2Q8VC34 614 aa19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 YarsQ91WQ3 528 aaKnown RBP19.91■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Arhgap29Q8CGF1 1266 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Pex19Q8VCI5 299 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Spats2lQ91WJ7 558 aaKnown RBP19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Homer2Q9QWW1 354 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Pdcd7Q9WTY1 482 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Myo1gQ5SUA5 1024 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 LnpkQ7TQ95 425 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Sept9Q80UG5 583 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Trim9Q8C7M3 817 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Tnnc2P20801 160 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Mcl1P97287 331 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Map3k7Q62073 579 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Morc4Q8BMD7 928 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Mmrn2A6H6E2 943 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Atp2c2A7L9Z8 944 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Vmn2r71L7N2D8 855 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Ankrd23Q812A3 306 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Dnajc3Q91YW3 504 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 4921530L21RikQ9CQ47 274 aa19.9■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Gemin5Q8BX17 1502 aaKnown RBP19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Gm28360A0A087WR25 190 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Gm45261A0A1B0GSP6 197 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Ccnyl1D3YUJ3 367 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 D1Pas1P16381 660 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Tmod1P49813 359 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Micall2Q3TN34 1009 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Kdm7aQ3UWM4 940 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Vav2Q60992 868 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Hoxa13Q62424 386 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Hdac10Q6P3E7 666 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Lrrc1Q80VQ1 524 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Pcdhb12Q91Y07 789 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 RpainQ9CWY9 219 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Atp6v1e2Q9D593 226 aa19.89■□□□□ 0.78
Ebf3-201ENSMUST00000033378 Iqgap1Q9JKF1 1657 aaKnown RBP19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Gimd1E9PW74 217 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Wfs1P56695 890 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Q8R1Y2 203 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Pls3Q99K51 630 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Ulk4Q3V129 1303 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Gm9774A0A0A6YVU8 407 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Apba1B2RUJ5 842 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Psmd14O35593 310 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Runx2Q08775 607 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Fsd1lQ8BYN5 507 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Zfyve19Q9DAZ9 389 aa19.89■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Ica1lQ3TY65 431 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Hyou1Q9JKR6 999 aaKnown RBP19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Mst1rQ62190 1378 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Celf1P28659 486 aaKnown RBP19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Setd4P58467 439 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 EgfrQ01279 1210 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Sult1d1Q3UZZ6 295 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 McamQ8R2Y2 648 aaKnown RBP19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Zmynd10Q99ML0 440 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 CacybpQ9CXW3 229 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Capn9Q9D805 690 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 GgcxQ9QYC7 757 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Rnf17Q99MV7 1640 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 RubcnlQ3TD16 648 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Cabcoco1Q8CDT7 208 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Olfr552E9Q545 317 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Ttf2Q5NC05 1138 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Mms19Q9D071 1031 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Sertad1Q9JL10 236 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Tlr2Q9QUN7 784 aa19.88■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Herc3A6H6S0 1050 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Caln1Q9JJG7 219 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Eif2ak3Q9Z2B5 1114 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Ckap2Q3V1H1 664 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 PhkbQ7TSH2 1085 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Proser2Q8C5R2 471 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Coro7Q9D2V7 922 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Mrps9Q9D7N3 390 aaKnown RBP19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Fthl17aQ9DAX0 182 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Xbp1O35426 267 aa19.87■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms