RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Ppp4r4Q8C0Y0 875 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 HscbQ8K3A0 234 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Pdik1lQ8QZR7 341 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Krt5Q922U2 580 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 BlvraQ9CY64 295 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Robo2Q7TPD3 1470 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gfpt1P47856 697 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Exosc10P56960 887 aaKnown RBP17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cyp2c67Q569X9 491 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Trim59Q922Y2 403 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Prdm2A2A7B5 1709 aaKnown RBP17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Adamts18Q4VC17 1219 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Atg9aQ68FE2 551 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 JrklB2RRL2 523 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cdc25aP48964 514 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Agap2Q3UHD9 1186 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Skap1Q3UUV5 355 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cfap52Q5F201 620 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 ThrspQ62264 150 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Sept11Q8C1B7 431 aaKnown RBP17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 1700109H08RikQ9D9C0 210 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Aco1P28271 889 aaKnown RBP17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Spire2Q8K1S6 718 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Prkag2Q91WG5 566 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Srgap2Q91Z67 1071 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cttnbp2nlQ99LJ0 638 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ska2Q9CR46 120 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Rbm31yQ9D3U4 565 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Clcn6O35454 870 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Atp11aP98197 1187 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Klhl14Q69ZK5 630 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Rpf1Q7TND5 349 aaKnown RBP17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Nek8Q91ZR4 698 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cox16Q9CR63 106 aa17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 SmapQ9R0P4 181 aaKnown RBP17.86■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Timm44O35857 452 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gucy2fQ5SDA5 1108 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Osbpl2Q8BX94 484 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 PdhbQ9D051 359 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Chmp2aQ9DB34 222 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Pacsin2Q9WVE8 486 aaKnown RBP17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Rnf17Q99MV7 1640 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cyp19a1P28649 503 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gm10392Q3V3I3 114 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Atp6v0d2Q80SY3 350 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Prpsap1Q9D0M1 356 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Fthl17aQ9DAX0 182 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Tmod3Q9JHJ0 352 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Exoc7O35250 697 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 SfnO70456 248 aaKnown RBP17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 G3bp2P97379 482 aaKnown RBP17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Trim43aQ3TL54 445 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Vav2Q60992 868 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 NfrkbQ6PIJ4 1296 aaKnown RBP17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gga1Q8R0H9 635 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cyth1Q9QX11 398 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ubxn8Q9QZ49 277 aa17.85■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ttc38A3KMP2 465 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Lrriq4A6H6A4 596 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Snx12O70493 165 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Pla2g4bP0C871 782 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Setd4P58467 439 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Trim72Q1XH17 477 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Mettl17Q3U2U7 461 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ptpn14Q62130 1189 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ces1eQ64176 562 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Jade1Q6ZPI0 834 aaKnown RBP17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Tbc1d22bQ80VE5 505 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Tmem60Q8K174 133 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cyth3O08967 399 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Zmym1Q3TJB1 983 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Krt32Q62168 407 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Dhx40Q6PE54 779 aaKnown RBP17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ms4a5Q810P8 197 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Abi1Q8CBW3 481 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 EpgnQ924X1 152 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cnot8Q9D8X5 292 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Fam81bA0A140LI28 432 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gm29133A0A1B0GT72 266 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Sem1P60897 70 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gjb6P70689 261 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 PapolaQ61183 739 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Q80Y73 168 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Fndc3aQ8BX90 1198 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Klhl11Q8CE33 709 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Kiaa0391Q8JZY4 584 aaKnown RBP17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Abhd8Q8R0P8 439 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Arhgef7Q9ES28 862 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Prkab1Q9R078 270 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 FcgrtQ61559 365 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 TbckQ8BM85 762 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Olfr390Q8VEZ7 311 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 MbipQ99LQ1 341 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Snx24Q9CRB0 169 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Slc13a1Q9JHI4 594 aa17.84■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Veph1A1A535 833 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gm3127E9Q9P5 263 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gm3453K7N724 263 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gm21962L7N280 338 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 PtgdrP70263 357 aa17.83■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms