RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W TIF5P38431 405 aaKnown RBP4.27□□□□□ -1.73
VPS28YPL065W GAT2P40209 560 aa4.27□□□□□ -1.73
VPS28YPL065W YPI1P43587 155 aa4.27□□□□□ -1.73
VPS28YPL065W HXT11P54862 567 aa4.27□□□□□ -1.73
VPS28YPL065W PEX25Q02969 394 aa4.27□□□□□ -1.73
VPS28YPL065W PRP42Q03776 544 aaKnown RBP4.27□□□□□ -1.73
VPS28YPL065W RPN9Q04062 393 aaKnown RBP4.27□□□□□ -1.73
VPS28YPL065W RRP12Q12754 1228 aaKnown RBP4.27□□□□□ -1.73
VPS28YPL065W HEM15P16622 393 aa4.26□□□□□ -1.73
VPS28YPL065W RAD57P25301 460 aa4.26□□□□□ -1.73
VPS28YPL065W SWI3P32591 825 aa4.26□□□□□ -1.73
VPS28YPL065W OLA1P38219 394 aaKnown RBP4.26□□□□□ -1.73
VPS28YPL065W YBR137WP38276 179 aa4.26□□□□□ -1.73
VPS28YPL065W STP2P38704 541 aa4.26□□□□□ -1.73
VPS28YPL065W GPI16P38875 610 aa4.26□□□□□ -1.73
VPS28YPL065W STN1P38960 494 aa4.26□□□□□ -1.73
VPS28YPL065W PCF11P39081 626 aaPredicted RBP4.26□□□□□ -1.73
VPS28YPL065W YPS6P40583 537 aa4.26□□□□□ -1.73
VPS28YPL065W PIB2P53191 635 aa4.26□□□□□ -1.73
VPS28YPL065W URH1Q04179 340 aa4.26□□□□□ -1.73
VPS28YPL065W ATG34Q12292 412 aa4.26□□□□□ -1.73
VPS28YPL065W PDE2P06776 526 aa4.25□□□□□ -1.73
VPS28YPL065W ALG1P16661 449 aa4.25□□□□□ -1.73
VPS28YPL065W KKQ8P36004 724 aa4.25□□□□□ -1.73
VPS28YPL065W FAA2P39518 744 aa4.25□□□□□ -1.73
VPS28YPL065W YIL067CP40514 678 aa4.25□□□□□ -1.73
VPS28YPL065W YFL067WP43537 175 aa4.25□□□□□ -1.73
VPS28YPL065W IBD2P53892 351 aa4.25□□□□□ -1.73
VPS28YPL065W YDR341CQ05506 607 aaKnown RBP4.25□□□□□ -1.73
VPS28YPL065W SRL2Q12020 392 aa4.25□□□□□ -1.73
VPS28YPL065W YER078W-AQ3E7A2 54 aa4.25□□□□□ -1.73
VPS28YPL065W CYS4P32582 507 aaKnown RBP4.24□□□□□ -1.73
VPS28YPL065W PFF1P38244 976 aa4.24□□□□□ -1.73
VPS28YPL065W APE4P38821 490 aa4.24□□□□□ -1.73
VPS28YPL065W CHS6P40955 746 aa4.24□□□□□ -1.73
VPS28YPL065W SPG5P42933 373 aa4.24□□□□□ -1.73
VPS28YPL065W AZR1P50080 613 aa4.24□□□□□ -1.73
VPS28YPL065W ROG1P53118 685 aa4.24□□□□□ -1.73
VPS28YPL065W MEH1Q02205 184 aa4.24□□□□□ -1.73
VPS28YPL065W PPM1Q04081 328 aa4.24□□□□□ -1.73
VPS28YPL065W SNX3Q08826 162 aaKnown RBP4.24□□□□□ -1.73
VPS28YPL065W YKL097CP34245 136 aa4.23□□□□□ -1.73
VPS28YPL065W MRPL4P36517 319 aa4.23□□□□□ -1.73
VPS28YPL065W YER079WP40052 210 aaKnown RBP4.23□□□□□ -1.73
VPS28YPL065W NCA3P46955 337 aa4.23□□□□□ -1.73
VPS28YPL065W YMR181CQ03231 154 aa4.23□□□□□ -1.73
VPS28YPL065W ADD37Q03233 198 aa4.23□□□□□ -1.73
VPS28YPL065W CDC21P06785 304 aa4.22□□□□□ -1.73
VPS28YPL065W SPS22P25380 463 aa4.22□□□□□ -1.73
VPS28YPL065W PHO91P27514 894 aa4.22□□□□□ -1.73
VPS28YPL065W HSP104P31539 908 aaKnown RBP4.22□□□□□ -1.73
VPS28YPL065W PUP2P32379 260 aa4.22□□□□□ -1.73
VPS28YPL065W YBR056WP38081 501 aa4.22□□□□□ -1.73
VPS28YPL065W INM1P38710 295 aa4.22□□□□□ -1.73
VPS28YPL065W MTC6P38849 526 aa4.22□□□□□ -1.73
VPS28YPL065W MLH1P38920 769 aa4.22□□□□□ -1.73
VPS28YPL065W MDG1P53885 366 aa4.22□□□□□ -1.73
VPS28YPL065W STD1Q02794 444 aa4.22□□□□□ -1.73
VPS28YPL065W NFT1P0CE68 1218 aa4.21□□□□□ -1.74
VPS28YPL065W CPR4P25334 318 aa4.21□□□□□ -1.74
VPS28YPL065W LDB16P25587 256 aa4.21□□□□□ -1.74
VPS28YPL065W WWM1P43582 211 aaKnown RBP4.21□□□□□ -1.74
VPS28YPL065W MMT1Q03218 510 aa4.21□□□□□ -1.74
VPS28YPL065W RRP9Q06506 573 aaKnown RBP4.21□□□□□ -1.74
VPS28YPL065W ESA1Q08649 445 aa4.21□□□□□ -1.74
VPS28YPL065W RUP1Q12242 671 aa4.21□□□□□ -1.74
VPS28YPL065W YLR108CQ12259 485 aa4.21□□□□□ -1.74
VPS28YPL065W FRE6Q12473 712 aa4.21□□□□□ -1.74
VPS28YPL065W DST1P07273 309 aa4.2□□□□□ -1.74
VPS28YPL065W NRP1P32770 719 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
VPS28YPL065W QDR3P38227 689 aa4.2□□□□□ -1.74
VPS28YPL065W BRO1P48582 844 aa4.2□□□□□ -1.74
VPS28YPL065W YIP5P53108 310 aa4.2□□□□□ -1.74
VPS28YPL065W NDL1Q06568 189 aa4.2□□□□□ -1.74
VPS28YPL065W VPH1P32563 840 aaKnown RBP4.19□□□□□ -1.74
VPS28YPL065W MUD1P32605 298 aaKnown RBP4.19□□□□□ -1.74
VPS28YPL065W YSC83P32792 385 aa4.19□□□□□ -1.74
VPS28YPL065W RFS1P38234 210 aaKnown RBP4.19□□□□□ -1.74
VPS28YPL065W SIM1P40472 476 aa4.19□□□□□ -1.74
VPS28YPL065W PRM5P40476 318 aa4.19□□□□□ -1.74
VPS28YPL065W TOF1P53840 1238 aa4.19□□□□□ -1.74
VPS28YPL065W TSR1Q07381 788 aaKnown RBP4.19□□□□□ -1.74
VPS28YPL065W NSE1Q07913 336 aa4.19□□□□□ -1.74
VPS28YPL065W OPI3P05375 206 aa4.18□□□□□ -1.74
VPS28YPL065W SKN1P33336 771 aa4.18□□□□□ -1.74
VPS28YPL065W MNL1P38888 796 aa4.18□□□□□ -1.74
VPS28YPL065W SFH5P47008 294 aa4.18□□□□□ -1.74
VPS28YPL065W MLC1P53141 149 aa4.18□□□□□ -1.74
VPS28YPL065W YPL107WQ02873 248 aa4.18□□□□□ -1.74
VPS28YPL065W BCH1Q05029 724 aa4.18□□□□□ -1.74
VPS28YPL065W PBA1Q05778 276 aa4.18□□□□□ -1.74
VPS28YPL065W NFI1Q12216 726 aa4.18□□□□□ -1.74
VPS28YPL065W RNH203Q12338 110 aa4.18□□□□□ -1.74
VPS28YPL065W YSW1P38280 609 aa4.17□□□□□ -1.74
VPS28YPL065W WSS1P38838 269 aa4.17□□□□□ -1.74
VPS28YPL065W MMF1P40185 145 aaKnown RBP4.17□□□□□ -1.74
VPS28YPL065W JLP2P40206 208 aa4.17□□□□□ -1.74
VPS28YPL065W EPL1P43572 832 aa4.17□□□□□ -1.74
VPS28YPL065W YDR541CQ03049 344 aa4.17□□□□□ -1.74
VPS28YPL065W ECM7Q06200 448 aa4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms