RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	MCH2	P36032	473 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	RFS1	P38234	210 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	ECM8	P38246	354 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	RCK2	P38623	610 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	YHR202W	P38887	602 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SQS1	YNL224C	YEL025C	P39991	1188 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	SLZ1	P40167	298 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	RGD2	P43556	714 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	CTF18	P49956	741 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	TAF6	P53040	516 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	GND2	P53319	492 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	ATG4	P53867	494 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	ACT1	P60010	375 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	TIF35	Q04067	274 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	ADY4	Q05955	493 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	CDC73	Q06697	393 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	YDL086W	Q07505	273 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	PAM18	Q07914	168 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	AAD15	Q08361	143 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	YNG1	Q08465	219 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	YLR108C	Q12259	485 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	YLR361C-A	Q3E795	98 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	FSH3	Q99369	266 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	YLR419W	Q06698	1435 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	ADE6	P38972	1358 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	MES1	P00958	751 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	CMD1	P06787	147 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	SPT3	P06844	337 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	PPR1	P07272	904 aa	Predicted RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	ERG20	P08524	352 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	SEC12	P11655	471 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	UGA1	P17649	471 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	COQ1	P18900	473 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	SAR1	P20606	190 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	SLY1	P22213	666 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	RFA1	P22336	621 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	YIM1	P28625	365 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	ABD1	P32783	436 aa	Predicted RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	UPS2	P35200	230 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	AFG3	P39925	761 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	POG1	P40473	351 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	FMC1	P40491	155 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	SER33	P40510	469 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	MAM33	P40513	266 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	PAC11	P40960	533 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	PHO86	P46956	311 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	RPC17	P47076	161 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	YGR035C	P53222	116 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	TRM112	P53738	135 aa	Predicted RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	AQR1	P53943	586 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	PEX13	P80667	386 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	DYN2	Q02647	92 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	ROD1	Q02805	837 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	CSN9	Q03981	162 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	PPN1	Q04119	674 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	PEX30	Q06169	523 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	YDR306C	Q06640	478 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	ACK1	Q07622	623 aa	Predicted RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	HRD1	Q08109	551 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	GEP3	Q08622	556 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	RRD2	Q12461	358 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	RMP1	Q12530	201 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	HBN1	Q96VH4	193 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	THO2	P53552	1597 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	YOR304C-A	O14468	76 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	VPS34	P22543	875 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	YCK1	P23291	538 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	DAL2	P25335	343 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	YCR051W	P25631	222 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	TGL1	P34163	548 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	AST1	P35183	429 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	TUL1	P36096	758 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	NTR2	P36118	322 aa	Predicted RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	AGP2	P38090	596 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	SHE3	P38272	425 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	SHG1	P38337	142 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	JHD1	P40034	492 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	ALR2	P43553	858 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	COS5	P47187	383 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	RIB4	P50861	169 aa	Predicted RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	MAL13	P53338	473 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	OGG1	P53397	376 aa	Predicted RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	YNR065C	P53751	1116 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	ALG11	P53954	548 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	TIM44	Q01852	431 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	RPS15	Q01855	142 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	UTP6	Q02354	440 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	IRC15	Q02733	499 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	YPL077C	Q02831	240 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	ATP25	Q03153	612 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	MSC2	Q03455	724 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	EBS1	Q03466	884 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	RIF2	Q06208	395 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	ATG23	Q06671	453 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	SLF1	Q12034	447 aa	Known RBP	3.18	□□□□□ -1.9
SQS1	YNL224C	TMS1	Q12116	473 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	YOR022C	Q12204	715 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	RGT2	Q12300	763 aa		3.18	□□□□□ -1.9
SQS1	YNL224C	QCR7	P00128	127 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms