RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W YNL146WP53906 100 aa3.2□□□□□ -1.9
LIF1YGL090W YAT1P80235 687 aa3.2□□□□□ -1.9
LIF1YGL090W EKI1Q03764 534 aa3.2□□□□□ -1.9
LIF1YGL090W ATG26Q06321 1198 aa3.2□□□□□ -1.9
LIF1YGL090W VPS74Q06385 345 aa3.2□□□□□ -1.9
LIF1YGL090W IPK1Q06667 281 aa3.2□□□□□ -1.9
LIF1YGL090W RAX1Q08760 435 aa3.2□□□□□ -1.9
LIF1YGL090W VAM3Q12241 283 aa3.2□□□□□ -1.9
LIF1YGL090W FRE7Q12333 620 aa3.2□□□□□ -1.9
LIF1YGL090W ATG31Q12421 196 aa3.2□□□□□ -1.9
LIF1YGL090W RRD2Q12461 358 aa3.2□□□□□ -1.9
LIF1YGL090W SEY1Q99287 776 aa3.2□□□□□ -1.9
LIF1YGL090W RKR1Q04781 1562 aa3.2□□□□□ -1.9
LIF1YGL090W RPL35AP0CX84 120 aaKnown RBP3.19□□□□□ -1.9
LIF1YGL090W RPL35BP0CX85 120 aaKnown RBP3.19□□□□□ -1.9
LIF1YGL090W PMR1P13586 950 aa3.19□□□□□ -1.9
LIF1YGL090W YAK1P14680 807 aa3.19□□□□□ -1.9
LIF1YGL090W FAR1P21268 830 aa3.19□□□□□ -1.9
LIF1YGL090W UTR1P21373 530 aa3.19□□□□□ -1.9
LIF1YGL090W MRPL8P22353 238 aa3.19□□□□□ -1.9
LIF1YGL090W PPH22P23595 377 aa3.19□□□□□ -1.9
LIF1YGL090W RPL24BP24000 155 aaKnown RBP3.19□□□□□ -1.9
LIF1YGL090W KRE2P27809 442 aa3.19□□□□□ -1.9
LIF1YGL090W CIN8P27895 1000 aa3.19□□□□□ -1.9
LIF1YGL090W PSO2P30620 661 aa3.19□□□□□ -1.9
LIF1YGL090W SKG6P32900 734 aaPredicted RBP3.19□□□□□ -1.9
LIF1YGL090W ECT1P33412 323 aa3.19□□□□□ -1.9
LIF1YGL090W PAD1P33751 242 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
LIF1YGL090W TIF3P34167 436 aaKnown RBP3.19□□□□□ -1.9
LIF1YGL090W FES1P38260 290 aa3.19□□□□□ -1.9
LIF1YGL090W IML3P38265 245 aa3.19□□□□□ -1.9
LIF1YGL090W SPP381P38282 291 aaPredicted RBP3.19□□□□□ -1.9
LIF1YGL090W EHT1P38295 451 aa3.19□□□□□ -1.9
LIF1YGL090W YMR262WP38430 313 aa3.19□□□□□ -1.9
LIF1YGL090W RTC3P38804 111 aaPredicted RBP3.19□□□□□ -1.9
LIF1YGL090W YHR122WP38829 231 aa3.19□□□□□ -1.9
LIF1YGL090W CRG1P38892 291 aaRIP-Chip data3.19□□□□□ -1.9not detected
LIF1YGL090W FHL1P39521 936 aa3.19□□□□□ -1.9
LIF1YGL090W TMN3P40071 706 aa3.19□□□□□ -1.9
LIF1YGL090W YIL001WP40560 513 aa3.19□□□□□ -1.9
LIF1YGL090W TOS3P43637 560 aa3.19□□□□□ -1.9
LIF1YGL090W IRC8P47046 822 aa3.19□□□□□ -1.9
LIF1YGL090W MIG2P53035 382 aa3.19□□□□□ -1.9
LIF1YGL090W COS12P53053 380 aa3.19□□□□□ -1.9
LIF1YGL090W KAP114P53067 1004 aa3.19□□□□□ -1.9
LIF1YGL090W PXR1P53335 271 aaPredicted RBP3.19□□□□□ -1.9
LIF1YGL090W MRPL50P53724 139 aa3.19□□□□□ -1.9
LIF1YGL090W DIA1P54005 336 aa3.19□□□□□ -1.9
LIF1YGL090W STP1Q00947 519 aa3.19□□□□□ -1.9
LIF1YGL090W YMR209CQ03648 457 aa3.19□□□□□ -1.9
LIF1YGL090W ENT5Q03769 411 aaKnown RBP3.19□□□□□ -1.9
LIF1YGL090W GFD1Q04839 188 aaKnown RBP3.19□□□□□ -1.9
LIF1YGL090W CTS2Q06350 511 aa3.19□□□□□ -1.9
LIF1YGL090W CMS1Q07897 291 aaKnown RBP3.19□□□□□ -1.9
LIF1YGL090W TLG2Q08144 397 aa3.19□□□□□ -1.9
LIF1YGL090W SIL1Q08199 421 aa3.19□□□□□ -1.9
LIF1YGL090W CRT10Q08226 957 aa3.19□□□□□ -1.9
LIF1YGL090W BTS1Q12051 335 aa3.19□□□□□ -1.9
LIF1YGL090W PRS5Q12265 496 aaKnown RBP3.19□□□□□ -1.9
LIF1YGL090W ESC1Q03661 1658 aaKnown RBP3.19□□□□□ -1.9
LIF1YGL090W SEC3P33332 1336 aaKnown RBP3.19□□□□□ -1.9
LIF1YGL090W DRS2P39524 1355 aa3.18□□□□□ -1.9
LIF1YGL090W CDC21P06785 304 aa3.18□□□□□ -1.9
LIF1YGL090W PUT2P07275 575 aa3.18□□□□□ -1.9
LIF1YGL090W RPL27AP0C2H6 136 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W RPL27BP0C2H7 136 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W RPL31BP0C2H9 113 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W YMR085WP0CF18 432 aa3.18□□□□□ -1.9
LIF1YGL090W SEC63P14906 663 aa3.18□□□□□ -1.9
LIF1YGL090W TUP1P16649 713 aa3.18□□□□□ -1.9
LIF1YGL090W ART10P18634 518 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W CMK2P22517 447 aa3.18□□□□□ -1.9
LIF1YGL090W YCP4P25349 247 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W PUP3P25451 205 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W RPS5P26783 225 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W PPA2P28239 310 aa3.18□□□□□ -1.9
LIF1YGL090W YIM1P28625 365 aa3.18□□□□□ -1.9
LIF1YGL090W ECM25P32525 599 aa3.18□□□□□ -1.9
LIF1YGL090W DSS4P32601 143 aa3.18□□□□□ -1.9
LIF1YGL090W FRE1P32791 686 aa3.18□□□□□ -1.9
LIF1YGL090W SPT10P35208 640 aa3.18□□□□□ -1.9
LIF1YGL090W RPF2P36160 344 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W AAP1P37898 856 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W ASC1P38011 319 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W STB5P38699 743 aa3.18□□□□□ -1.9
LIF1YGL090W PHM8P40025 321 aa3.18□□□□□ -1.9
LIF1YGL090W MEP2P41948 499 aa3.18□□□□□ -1.9
LIF1YGL090W SPG5P42933 373 aa3.18□□□□□ -1.9
LIF1YGL090W LSM1P47017 172 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W UBX6P47049 396 aa3.18□□□□□ -1.9
LIF1YGL090W AIM22P47051 409 aa3.18□□□□□ -1.9
LIF1YGL090W RPS7BP48164 190 aaKnown RBP3.18□□□□□ -1.9
LIF1YGL090W TAF6P53040 516 aa3.18□□□□□ -1.9
LIF1YGL090W YIP5P53108 310 aa3.18□□□□□ -1.9
LIF1YGL090W IST1P53843 298 aaPredicted RBP3.18□□□□□ -1.9
LIF1YGL090W IPI3P53877 555 aa3.18□□□□□ -1.9
LIF1YGL090W SAM50P53969 484 aa3.18□□□□□ -1.9
LIF1YGL090W SHR3Q02774 210 aa3.18□□□□□ -1.9
LIF1YGL090W YMR160WQ03823 816 aa3.18□□□□□ -1.9
LIF1YGL090W YMR310CQ04867 317 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms