RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	ALG1	P16661	449 aa		4.23	□□□□□ -1.73
YPK3	YBR028C	RIB5	P38145	238 aa		4.23	□□□□□ -1.73
YPK3	YBR028C	YBP1	P38315	674 aa		4.23	□□□□□ -1.73
YPK3	YBR028C	YHR218W	P38899	603 aa		4.23	□□□□□ -1.73
YPK3	YBR028C	IBD2	P53892	351 aa		4.23	□□□□□ -1.73
YPK3	YBR028C	YTH1	Q06102	208 aa	Predicted RBP	4.23	□□□□□ -1.73
YPK3	YBR028C	YER078W-A	Q3E7A2	54 aa		4.23	□□□□□ -1.73
YPK3	YBR028C	SLY1	P22213	666 aa		4.22	□□□□□ -1.73
YPK3	YBR028C	MLH1	P38920	769 aa		4.22	□□□□□ -1.73
YPK3	YBR028C	MDG1	P53885	366 aa		4.22	□□□□□ -1.73
YPK3	YBR028C	MEH1	Q02205	184 aa		4.22	□□□□□ -1.73
YPK3	YBR028C	KKQ8	P36004	724 aa		4.21	□□□□□ -1.74
YPK3	YBR028C	PCF11	P39081	626 aa	Predicted RBP	4.21	□□□□□ -1.74
YPK3	YBR028C	YIL067C	P40514	678 aa		4.21	□□□□□ -1.74
YPK3	YBR028C	YMR181C	Q03231	154 aa		4.21	□□□□□ -1.74
YPK3	YBR028C	NDL1	Q06568	189 aa		4.21	□□□□□ -1.74
YPK3	YBR028C	RUP1	Q12242	671 aa		4.21	□□□□□ -1.74
YPK3	YBR028C	CYS4	P32582	507 aa	Known RBP	4.2	□□□□□ -1.74
YPK3	YBR028C	YKL097C	P34245	136 aa		4.2	□□□□□ -1.74
YPK3	YBR028C	PFF1	P38244	976 aa		4.2	□□□□□ -1.74
YPK3	YBR028C	AZR1	P50080	613 aa		4.2	□□□□□ -1.74
YPK3	YBR028C	ROG1	P53118	685 aa		4.2	□□□□□ -1.74
YPK3	YBR028C	PIB2	P53191	635 aa		4.2	□□□□□ -1.74
YPK3	YBR028C	RRP9	Q06506	573 aa	Known RBP	4.2	□□□□□ -1.74
YPK3	YBR028C	SNX3	Q08826	162 aa	Known RBP	4.2	□□□□□ -1.74
YPK3	YBR028C	PDE2	P06776	526 aa		4.19	□□□□□ -1.74
YPK3	YBR028C	SPS22	P25380	463 aa		4.19	□□□□□ -1.74
YPK3	YBR028C	HSP104	P31539	908 aa	Known RBP	4.19	□□□□□ -1.74
YPK3	YBR028C	SIM1	P40472	476 aa		4.19	□□□□□ -1.74
YPK3	YBR028C	STD1	Q02794	444 aa		4.19	□□□□□ -1.74
YPK3	YBR028C	PPM1	Q04081	328 aa		4.19	□□□□□ -1.74
YPK3	YBR028C	NFT1	P0CE68	1218 aa		4.19	□□□□□ -1.74
YPK3	YBR028C	INM1	P38710	295 aa		4.19	□□□□□ -1.74
YPK3	YBR028C	YFL067W	P43537	175 aa		4.19	□□□□□ -1.74
YPK3	YBR028C	BOR1	P53838	576 aa		4.19	□□□□□ -1.74
YPK3	YBR028C	CDC21	P06785	304 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	CPR4	P25334	318 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	PHO91	P27514	894 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YPK3	YBR028C	YBR056W	P38081	501 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	YBR139W	P38109	508 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	QDR3	P38227	689 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	YER079W	P40052	210 aa	Known RBP	4.18	□□□□□ -1.74
YPK3	YBR028C	MLC1	P53141	149 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	IMP4	P53941	290 aa	Known RBP	4.18	□□□□□ -1.74
YPK3	YBR028C	YPL107W	Q02873	248 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	MMT1	Q03218	510 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	ESA1	Q08649	445 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	YLR108C	Q12259	485 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	FRE6	Q12473	712 aa		4.18	□□□□□ -1.74
YPK3	YBR028C	DST1	P07273	309 aa		4.17	□□□□□ -1.74
YPK3	YBR028C	CPR3	P25719	182 aa		4.17	□□□□□ -1.74
YPK3	YBR028C	VPH1	P32563	840 aa	Known RBP	4.17	□□□□□ -1.74
YPK3	YBR028C	YSC83	P32792	385 aa		4.17	□□□□□ -1.74
YPK3	YBR028C	RFS1	P38234	210 aa	Known RBP	4.17	□□□□□ -1.74
YPK3	YBR028C	MTC6	P38849	526 aa		4.17	□□□□□ -1.74
YPK3	YBR028C	NCA3	P46955	337 aa		4.17	□□□□□ -1.74
YPK3	YBR028C	BCH1	Q05029	724 aa		4.17	□□□□□ -1.74
YPK3	YBR028C	NSE1	Q07913	336 aa		4.17	□□□□□ -1.74
YPK3	YBR028C	RNH203	Q12338	110 aa		4.17	□□□□□ -1.74
YPK3	YBR028C	SKS1	Q12505	502 aa		4.17	□□□□□ -1.74
YPK3	YBR028C	YSW1	P38280	609 aa		4.16	□□□□□ -1.74
YPK3	YBR028C	BRO1	P48582	844 aa		4.16	□□□□□ -1.74
YPK3	YBR028C	YDR541C	Q03049	344 aa		4.16	□□□□□ -1.74
YPK3	YBR028C	ERV2	Q12284	196 aa		4.16	□□□□□ -1.74
YPK3	YBR028C	DAP2	P18962	818 aa		4.15	□□□□□ -1.74
YPK3	YBR028C	ADH5	P38113	351 aa	Known RBP	4.15	□□□□□ -1.74
YPK3	YBR028C	JLP2	P40206	208 aa		4.15	□□□□□ -1.74
YPK3	YBR028C	PRM5	P40476	318 aa		4.15	□□□□□ -1.74
YPK3	YBR028C	SFH5	P47008	294 aa		4.15	□□□□□ -1.74
YPK3	YBR028C	PMT5	P52867	743 aa		4.15	□□□□□ -1.74
YPK3	YBR028C	TLG2	Q08144	397 aa		4.15	□□□□□ -1.74
YPK3	YBR028C	TPT1	Q12272	230 aa	Known RBP	4.15	□□□□□ -1.74
YPK3	YBR028C	OPI1	P21957	404 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	MUD1	P32605	298 aa	Known RBP	4.14	□□□□□ -1.75
YPK3	YBR028C	SKN1	P33336	771 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	WWM1	P43582	211 aa	Known RBP	4.14	□□□□□ -1.75
YPK3	YBR028C	TOS2	P50078	622 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	YIP5	P53108	310 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	TOF1	P53840	1238 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	PBA1	Q05778	276 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	ECM7	Q06200	448 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	TSR1	Q07381	788 aa	Known RBP	4.14	□□□□□ -1.75
YPK3	YBR028C	TRP1	P00912	224 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	OPI3	P05375	206 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	CYC3	P06182	269 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	MRPL4	P36517	319 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	MNL1	P38888	796 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	CCT4	P39078	528 aa	Known RBP	4.14	□□□□□ -1.75
YPK3	YBR028C	EOS1	P53938	366 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	ELP3	Q02908	557 aa	Known RBP	4.14	□□□□□ -1.75
YPK3	YBR028C	YOR387C	Q08910	206 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	NFI1	Q12216	726 aa		4.14	□□□□□ -1.75
YPK3	YBR028C	RPL12A	P0CX53	165 aa	Known RBP	4.13	□□□□□ -1.75
YPK3	YBR028C	RPL12B	P0CX54	165 aa		4.13	□□□□□ -1.75
YPK3	YBR028C	YCL068C	P25593	260 aa		4.13	□□□□□ -1.75
YPK3	YBR028C	MSP1	P28737	362 aa		4.13	□□□□□ -1.75
YPK3	YBR028C	AVT5	P38176	459 aa		4.13	□□□□□ -1.75
YPK3	YBR028C	PAC11	P40960	533 aa		4.13	□□□□□ -1.75
YPK3	YBR028C	MTM1	P53320	366 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 9 ms