RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 RAB11FIP4Q86YS3 637 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 DCAF4Q8WV16 495 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 EDAQ92838 391 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 TOP1MTQ969P6 601 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 ASIC4Q96FT7 647 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 TMEM87BQ96K49 555 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 TTC14Q96N46 770 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 TBC1D32Q96NH3 1257 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 TM6SF1Q9BZW5 370 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 NSUN3Q9H649 340 aaKnown RBP8.58□□□□□ -1.04
PHGDH-225ENST00000641720 KAT14Q9H8E8 782 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 ZSWIM6Q9HCJ5 1215 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 INSL6Q9Y581 213 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 CTDP1Q9Y5B0 961 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-225ENST00000641720 CHD8Q9HCK8 2581 aa8.58□□□□□ -1.04
PHGDH-225ENST00000641720 LOC730098B7Z3J9 87 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 OPLAHO14841 1288 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 GRM6O15303 877 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 LINC01565O15544 149 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 EYA4O95677 639 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 HMGB1P09429 215 aaKnown RBP8.57□□□□□ -1.04
PHGDH-225ENST00000641720 GOLGA8HP0CJ92 632 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 RXRAP19793 462 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 CALML3P27482 149 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 PSMA5P28066 241 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 PSEN2P49810 448 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 VCPP55072 806 aaKnown RBP8.57□□□□□ -1.04
PHGDH-225ENST00000641720 GHRHRQ02643 423 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 GPM6BQ13491 265 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 TOB2Q14106 344 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-225ENST00000641720 IKBKEQ14164 716 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 SART3Q15020 963 aaKnown RBP8.57□□□□□ -1.04
PHGDH-225ENST00000641720 LY6KQ17RY6 165 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 CCDC96Q2M329 555 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 SLC35G1Q2M3R5 365 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 CCDC178Q5BJE1 867 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 RNF207Q6ZRF8 634 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 Q6ZUG5 572 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 RUFY3Q7L099 469 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 SGMS1Q86VZ5 419 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 TMEM192Q8IY95 271 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 ZNF654Q8IZM8 581 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 CRIPAKQ8N1N5 446 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 CCDC155Q8N6L0 562 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 SAMD11Q96NU1 681 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 C16orf70Q9BSU1 422 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 MTA3Q9BTC8 594 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 ZBED2Q9BTP6 218 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 CPVLQ9H3G5 476 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 DDX41Q9UJV9 622 aaKnown RBP8.57□□□□□ -1.04
PHGDH-225ENST00000641720 BRPF3Q9ULD4 1205 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 CYP46A1Q9Y6A2 500 aa8.57□□□□□ -1.04
PHGDH-225ENST00000641720 MYH9P35579 1960 aaKnown RBP8.57□□□□□ -1.04
PHGDH-225ENST00000641720 CACNA1IQ9P0X4 2223 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 ERICH2A1L162 156 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 PTPDC1A2A3K4 754 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 PROB1E7EW31 1015 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 GLP2RO95838 553 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 ZNF286BP0CG31 522 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 DNAJB1P25685 340 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 LIFRP42702 1097 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 PTPN5P54829 565 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 ADAM17P78536 824 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 ZNF543Q08ER8 600 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 APOBRQ0VD83 1088 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 TROAPQ12815 778 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 SMAD4Q13485 552 aaKnown RBP8.56□□□□□ -1.04
PHGDH-225ENST00000641720 GRM4Q14833 912 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 CSPP1Q1MSJ5 1256 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 APOA5Q6Q788 366 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 NFXL1Q6ZNB6 911 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 TRIM67Q6ZTA4 783 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 MICU3Q86XE3 530 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 RGS22Q8NE09 1264 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 SYTL5Q8TDW5 730 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-225ENST00000641720 CLP1Q92989 425 aaKnown RBP8.56□□□□□ -1.04
PHGDH-225ENST00000641720 BRF1Q92994 677 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 MFSD14AQ96MC6 490 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 LARP6Q9BRS8 491 aaKnown RBP8.56□□□□□ -1.04
PHGDH-225ENST00000641720 AGXT2Q9BYV1 514 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 GPCPD1Q9NPB8 672 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 CLDND1Q9NY35 253 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 CLEC1BQ9P126 229 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 ISY1Q9ULR0 285 aaKnown RBP8.56□□□□□ -1.04
PHGDH-225ENST00000641720 NID2Q14112 1375 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 DOCK6Q96HP0 2047 aa8.56□□□□□ -1.04
PHGDH-225ENST00000641720 GPR179Q6PRD1 2367 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 PATJQ8NI35 1801 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 KLF18A0A0U1RQI7 1052 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 TMEM221A6NGB7 291 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 GOLGA8BA8MQT2 603 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 M0R296 226 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 DDAH1O94760 285 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 GH1P01241 217 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 AK2P54819 239 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 PDE4DQ08499 809 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 ADAM15Q13444 863 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 MFSD10Q14728 455 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 KIAA0753Q2KHM9 967 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 CATIPQ7Z7H3 387 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms