RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-222ENST00000640853 EMILIN3Q9NT22 766 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 EIF4G3O43432 1585 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 PFDN6O15212 129 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 CTNND1O60716 968 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 CXCR5P32302 372 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 GCKP35557 465 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 MAN2A1Q16706 1144 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 LRRC43Q8N309 656 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 MAD1L1Q9Y6D9 718 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ADAMTS12P58397 1594 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.3□□□□□ -1.88
LPP-222ENST00000640853 PGRMC1O00264 195 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 SASH3O75995 380 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 DLATP10515 647 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 TRIM50Q86XT4 487 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 GPIHBP1Q8IV16 184 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 PARP9Q8IXQ6 854 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 SMYD4Q8IYR2 804 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 TSPYL2Q9H2G4 693 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 TRPC5Q9UL62 973 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 A0A1B0GTH6 734 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ATG16L1Q676U5 607 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 KRT39Q6A163 491 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 LRRC31Q6UY01 552 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 RASGRP2Q7LDG7 609 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 PCGF5Q86SE9 256 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 RAB21Q9UL25 225 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ZBTB1Q9Y2K1 713 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 MAP3K15Q6ZN16 1313 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 TNNI1P19237 187 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 CCNE1P24864 410 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 LSP1P33241 339 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 NKX1-1Q15270 411 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 DPP8Q6V1X1 898 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 PNKPQ96T60 521 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 FGFR1OP2Q9NVK5 253 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ANGPTL2Q9UKU9 493 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 NOVA2Q9UNW9 492 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 CARMIL3Q8ND23 1372 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 NOP56O00567 594 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 FOXN1O15353 648 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 NSFP46459 744 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 ADCY2Q08462 1091 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ASPRV1Q53RT3 343 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 MIER3Q7Z3K6 550 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 SPATA4Q8NEY3 305 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 TMEM60Q9H2L4 133 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 PLAAQ9Y263 795 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 USTQ9Y2C2 406 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 PCDHB6Q9Y5E3 794 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ICE1Q9Y2F5 2266 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ERVK-7P63135 1459 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 H0YIN7 160 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 FAM133BQ5BKY9 247 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 STOX1Q6ZVD7 989 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 IGDCC4Q8TDY8 1250 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 IGFLR1Q9H665 355 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ADAMTS1Q9UHI8 967 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 KDM6BO15054 1643 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 RPS6KA5O75582 802 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 PRPSAP1Q14558 356 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 MESDQ14696 234 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 HLFQ16534 295 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 FAM26FQ5R3K3 315 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 KRT27Q7Z3Y8 459 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 EFHD1Q9BUP0 239 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ROPN1BQ9BZX4 212 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 ROPN1Q9HAT0 212 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.3□□□□□ -1.885e-7■□□□□ 10.3
LPP-222ENST00000640853 ARPP21Q9UBL0 812 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 hCG_2014768A0A024R1R8 64 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 SNAP23O00161 211 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 NBPF10Q6P3W6 841 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 SYDE1Q6ZW31 735 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 FBXO11Q86XK2 927 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ZNF513Q8N8E2 541 aaPredicted RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 CERKQ8TCT0 537 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 GRAMD1AQ96CP6 724 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 LRGUKQ96M69 825 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 PHKA1P46020 1223 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 DEUP1Q05D60 604 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 MTF1Q14872 753 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ERFEQ4G0M1 354 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 CHP1Q99653 195 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 PARVGQ9HBI0 331 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 LOC102724428A0A0B4J2F2 783 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 ECEL1O95672 775 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 MAPK4P31152 587 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 SLC1A1P43005 524 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 SIK1P57059 783 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 TRIM28Q13263 835 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 ZYXQ15942 572 aaKnown RBP3.3□□□□□ -1.88
LPP-222ENST00000640853 TMTC3Q6ZXV5 915 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 SRLQ86TD4 932 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 HACE1Q8IYU2 909 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 HDAC6Q9UBN7 1215 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 A0A1W2PQJ5 194 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 GYG1P46976 350 aa3.3□□□□□ -1.88
LPP-222ENST00000640853 NR5A1Q13285 461 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms