RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 MYO1FO00160 1098 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 TSPAN9O75954 239 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 LCA5LO95447 670 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 AGTP01019 485 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 MYL1P05976 194 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 NQO1P15559 274 aaKnown RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 CA8P35219 290 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 CCDC15Q0P6D6 951 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 NAA30Q147X3 362 aaPredicted RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 PSMD6Q15008 389 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 TRIM60Q495X7 471 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 NOSTRINQ8IVI9 506 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 ERMNQ8TAM6 284 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 TRIM11Q96F44 468 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 VPS50Q96JG6 964 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 PUS3Q9BZE2 481 aaKnown RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 TRAF3IP3Q9Y228 551 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 PARP3Q9Y6F1 533 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 UBE4BO95155 1302 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 PITPNM2Q9BZ72 1349 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 METP08581 1390 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 ARHGAP42A6NI28 874 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 MATN2O00339 956 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 HLA-DOAP06340 250 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 PDHA1P08559 390 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 MCF2P10911 925 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 VPS41P49754 854 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 OLR1P78380 273 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 MAGEF1Q9HAY2 307 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 SENP1Q9P0U3 644 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 WDR46O15213 610 aaKnown RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 GNA11P29992 359 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 GJC1P36383 396 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 TXKP42681 527 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 ECE1P42892 770 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 SCTRP47872 440 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 MTTPP55157 894 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 KRT76Q01546 638 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 GUCY2DQ02846 1103 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 CCDC144BQ3MJ40 725 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 PATL1Q86TB9 770 aaKnown RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 LZTS2Q9BRK4 669 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 USP15Q9Y4E8 981 aaPredicted RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 AATKQ6ZMQ8 1374 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 SH3TC1Q8TE82 1336 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 ZNF839A8K0R7 811 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 KPNA4O00629 521 aaPredicted RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 ASAP2O43150 1006 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 ADARP55265 1226 aaKnown RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 GSTO1P78417 241 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 CAV1Q03135 178 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 DNAL1Q4LDG9 190 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 AKNAD1Q5T1N1 836 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 THOC7Q6I9Y2 204 aaKnown RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 ZNF280DQ6N043 979 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 SV2BQ7L1I2 683 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 DYMQ7RTS9 669 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 SCYL3Q8IZE3 742 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 MMGT1Q8N4V1 131 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 NDEL1Q9GZM8 345 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 POLR3EQ9NVU0 708 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 AP4S1Q9Y587 144 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 PCDH11XQ9BZA7 1347 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 PCDH11YQ9BZA8 1340 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 XPOTO43592 962 aaKnown RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 KRT3P12035 628 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 ADORA1P30542 326 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 CDR2Q01850 454 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 NONOQ15233 471 aaKnown RBP eCLIP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 EP400NLQ6ZTU2 488 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 PALM2Q8IXS6 379 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 ZNF654Q8IZM8 581 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 FUKQ8N0W3 1084 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 RBBP8NLQ8NC74 664 aaPredicted RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 C1orf131Q8NDD1 294 aaKnown RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 GSDMAQ96QA5 445 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 LRRC37BQ96QE4 947 aa8.92□□□□□ -0.98
NECAP1-227ENST00000640648 FAM207AQ9NSI2 230 aaPredicted RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 DNAJC17Q9NVM6 304 aaKnown RBP8.92□□□□□ -0.98
NECAP1-227ENST00000640648 CPA3P15088 417 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 ATICP31939 592 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 EIF6P56537 245 aaKnown RBP8.91□□□□□ -0.98
NECAP1-227ENST00000640648 GRIN1Q05586 938 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 PLS1Q14651 629 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 NECTIN1Q15223 517 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 TBCCQ15814 346 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 NXNQ6DKJ4 435 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 TMEM110Q86TL2 294 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 SPATA5Q8NB90 893 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 RBM41Q96IZ5 413 aaKnown RBP8.91□□□□□ -0.98
NECAP1-227ENST00000640648 TRIM31Q9BZY9 425 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 GPHNQ9NQX3 736 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-227ENST00000640648 ST7Q9NRC1 585 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 CCNT1O60563 726 aaKnown RBP8.91□□□□□ -0.98
NECAP1-227ENST00000640648 DAB1O75553 588 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 ESRRAP11474 423 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-227ENST00000640648 RFC4P35249 363 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 ARHGAP4P98171 946 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 C11orf91Q3C1V1 193 aa8.91□□□□□ -0.98
NECAP1-227ENST00000640648 ZCWPW2Q504Y3 356 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms