RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ACTR2P61160 394 aa30.31■■■□□ 2.44
VEGFA-231ENST00000640499 SETQ01105 290 aaPredicted RBP30.31■■■□□ 2.44
VEGFA-231ENST00000640499 Q4G0T1 1027 aa30.31■■■□□ 2.44
VEGFA-231ENST00000640499 FAM47CQ5HY64 1035 aa30.31■■■□□ 2.44
VEGFA-231ENST00000640499 BADQ92934 168 aa30.31■■■□□ 2.44
VEGFA-231ENST00000640499 GJA10Q969M2 543 aa30.31■■■□□ 2.44
VEGFA-231ENST00000640499 SDF4Q9BRK5 362 aa30.31■■■□□ 2.44
VEGFA-231ENST00000640499 ZNF577Q9BSK1 485 aa30.31■■■□□ 2.44
VEGFA-231ENST00000640499 DDX39AO00148 427 aaKnown RBP30.3■■■□□ 2.44
VEGFA-231ENST00000640499 TLR3O15455 904 aaKnown RBP30.3■■■□□ 2.44
VEGFA-231ENST00000640499 ATG7O95352 703 aa30.3■■■□□ 2.44
VEGFA-231ENST00000640499 FBXO18Q8NFZ0 1043 aa30.3■■■□□ 2.44
VEGFA-231ENST00000640499 C8orf76Q96K31 380 aa30.3■■■□□ 2.44
VEGFA-231ENST00000640499 KATNAL1Q9BW62 490 aa30.3■■■□□ 2.44
VEGFA-231ENST00000640499 PRKAG2Q9UGJ0 569 aa30.3■■■□□ 2.44
VEGFA-231ENST00000640499 GTF2IRD1Q9UHL9 959 aa30.3■■■□□ 2.44
VEGFA-231ENST00000640499 UMODL1Q5DID0 1318 aa30.29■■■□□ 2.44
VEGFA-231ENST00000640499 LGR5O75473 907 aa30.29■■■□□ 2.44
VEGFA-231ENST00000640499 CYP2C9P11712 490 aa30.29■■■□□ 2.44
VEGFA-231ENST00000640499 MOXD1Q6UVY6 613 aa30.29■■■□□ 2.44
VEGFA-231ENST00000640499 RNPEPQ9H4A4 650 aa30.29■■■□□ 2.44
VEGFA-231ENST00000640499 WNT7AO00755 349 aa30.28■■■□□ 2.44
VEGFA-231ENST00000640499 SLC37A4O43826 429 aa30.28■■■□□ 2.44
VEGFA-231ENST00000640499 TIMP1P01033 207 aa30.28■■■□□ 2.44
VEGFA-231ENST00000640499 ZNF200P98182 395 aaPredicted RBP30.28■■■□□ 2.44
VEGFA-231ENST00000640499 TRIM29Q14134 588 aa30.28■■■□□ 2.44
VEGFA-231ENST00000640499 NEK8Q86SG6 692 aa30.28■■■□□ 2.44
VEGFA-231ENST00000640499 SLC5A5Q92911 643 aa30.28■■■□□ 2.44
VEGFA-231ENST00000640499 TRIP12Q14669 1992 aaPredicted RBP30.28■■■□□ 2.44
VEGFA-231ENST00000640499 HOXC8P31273 242 aa30.27■■■□□ 2.44
VEGFA-231ENST00000640499 BMP8BP34820 402 aa30.27■■■□□ 2.44
VEGFA-231ENST00000640499 LETM2Q2VYF4 491 aa30.27■■■□□ 2.44
VEGFA-231ENST00000640499 ABHD15Q6UXT9 468 aa30.27■■■□□ 2.44
VEGFA-231ENST00000640499 C7orf31Q8N865 590 aa30.27■■■□□ 2.44
VEGFA-231ENST00000640499 NOC4LQ9BVI4 516 aaKnown RBP30.27■■■□□ 2.44
VEGFA-231ENST00000640499 TBC1D22BQ9NU19 505 aa30.27■■■□□ 2.44
VEGFA-231ENST00000640499 IGKV6D-21A0A0A0MT36 114 aa30.26■■■□□ 2.43
VEGFA-231ENST00000640499 RAG1P15918 1043 aa30.26■■■□□ 2.43
VEGFA-231ENST00000640499 CUL4AQ13619 759 aa30.26■■■□□ 2.43
VEGFA-231ENST00000640499 FAM184AQ8NB25 1140 aa30.26■■■□□ 2.43
VEGFA-231ENST00000640499 ETNPPLQ8TBG4 499 aa30.26■■■□□ 2.43
VEGFA-231ENST00000640499 DHX38Q92620 1227 aaKnown RBP30.26■■■□□ 2.43
VEGFA-231ENST00000640499 SMIM10L2AP0DMW4 78 aa30.25■■■□□ 2.43
VEGFA-231ENST00000640499 SMIM10L2BP0DMW5 78 aa30.25■■■□□ 2.43
VEGFA-231ENST00000640499 CYP2C18P33260 490 aa30.25■■■□□ 2.43
VEGFA-231ENST00000640499 EPHB4P54760 987 aa30.25■■■□□ 2.43
VEGFA-231ENST00000640499 PTGISQ16647 500 aa30.25■■■□□ 2.43
VEGFA-231ENST00000640499 PPP4R3AQ6IN85 833 aa30.25■■■□□ 2.43
VEGFA-231ENST00000640499 PPP1R12CQ9BZL4 782 aa30.25■■■□□ 2.43
VEGFA-231ENST00000640499 BRMS1Q9HCU9 246 aa30.25■■■□□ 2.43
VEGFA-231ENST00000640499 DDX25Q9UHL0 483 aaKnown RBP30.25■■■□□ 2.43
VEGFA-231ENST00000640499 EMSYQ7Z589 1322 aa30.24■■■□□ 2.43
VEGFA-231ENST00000640499 SUPT20HL2P0C7V6 817 aa30.24■■■□□ 2.43
VEGFA-231ENST00000640499 B3GNT9Q6UX72 402 aa30.24■■■□□ 2.43
VEGFA-231ENST00000640499 WNT8BQ93098 351 aa30.24■■■□□ 2.43
VEGFA-231ENST00000640499 LBHD1Q9BQE6 289 aaPredicted RBP30.24■■■□□ 2.43
VEGFA-231ENST00000640499 WNT8AQ9H1J5 351 aa30.24■■■□□ 2.43
VEGFA-231ENST00000640499 HIPK3Q9H422 1215 aa30.24■■■□□ 2.43
VEGFA-231ENST00000640499 KIF28PB7ZC32 967 aa30.23■■■□□ 2.43
VEGFA-231ENST00000640499 PSMD10O75832 226 aa30.23■■■□□ 2.43
VEGFA-231ENST00000640499 GJB2P29033 226 aa30.23■■■□□ 2.43
VEGFA-231ENST00000640499 ADAM17P78536 824 aa30.23■■■□□ 2.43
VEGFA-231ENST00000640499 VWCEQ96DN2 955 aa30.23■■■□□ 2.43
VEGFA-231ENST00000640499 RIT2Q99578 217 aa30.23■■■□□ 2.43
VEGFA-231ENST00000640499 SMARCAD1Q9H4L7 1026 aa30.23■■■□□ 2.43
VEGFA-231ENST00000640499 RBAK-RBAKDNI3L0D1 243 aa30.22■■■□□ 2.43
VEGFA-231ENST00000640499 MARK3P27448 753 aa30.22■■■□□ 2.43
VEGFA-231ENST00000640499 MFSD5Q6N075 450 aa30.22■■■□□ 2.43
VEGFA-231ENST00000640499 ZNF746Q6NUN9 644 aaPredicted RBP30.22■■■□□ 2.43
VEGFA-231ENST00000640499 HAS1Q92839 578 aa30.22■■■□□ 2.43
VEGFA-231ENST00000640499 GLG1Q92896 1179 aa30.22■■■□□ 2.43
VEGFA-231ENST00000640499 KCNMB3Q9NPA1 279 aa30.22■■■□□ 2.43
VEGFA-231ENST00000640499 SETD4Q9NVD3 440 aa30.22■■■□□ 2.43
VEGFA-231ENST00000640499 ZNF215Q9UL58 517 aaPredicted RBP30.22■■■□□ 2.43
VEGFA-231ENST00000640499 CCNT1O60563 726 aaKnown RBP30.21■■■□□ 2.43
VEGFA-231ENST00000640499 PLPPR4Q7Z2D5 763 aa30.21■■■□□ 2.43
VEGFA-231ENST00000640499 CCDC60Q8IWA6 550 aaPredicted RBP30.21■■■□□ 2.43
VEGFA-231ENST00000640499 UBE2OQ9C0C9 1292 aaKnown RBP30.21■■■□□ 2.43
VEGFA-231ENST00000640499 FOXP1Q9H334 677 aaPredicted RBP30.21■■■□□ 2.43
VEGFA-231ENST00000640499 UNC45AQ9H3U1 944 aa30.21■■■□□ 2.43
VEGFA-231ENST00000640499 ERAP1Q9NZ08 941 aa30.21■■■□□ 2.43
VEGFA-231ENST00000640499 GCFC2P16383 781 aaKnown RBP30.2■■■□□ 2.43
VEGFA-231ENST00000640499 ATP4AP20648 1035 aa30.2■■■□□ 2.43
VEGFA-231ENST00000640499 STAT5BP51692 787 aa30.2■■■□□ 2.43
VEGFA-231ENST00000640499 KRT76Q01546 638 aa30.2■■■□□ 2.43
VEGFA-231ENST00000640499 SAFBQ15424 915 aaKnown RBP eCLIP30.2■■■□□ 2.43
VEGFA-231ENST00000640499 TRIM71Q2Q1W2 868 aaKnown RBP30.2■■■□□ 2.43
VEGFA-231ENST00000640499 LRCH2Q5VUJ6 765 aa30.2■■■□□ 2.43
VEGFA-231ENST00000640499 C16orf59Q7L2K0 433 aa30.2■■■□□ 2.43
VEGFA-231ENST00000640499 TRIOBPQ9H2D6 2365 aa30.2■■■□□ 2.42
VEGFA-231ENST00000640499 WDR81Q562E7 1941 aa30.2■■■□□ 2.42
VEGFA-231ENST00000640499 TREHO43280 583 aa30.19■■■□□ 2.42
VEGFA-231ENST00000640499 CCL23P55773 120 aa30.19■■■□□ 2.42
VEGFA-231ENST00000640499 PLCB4Q15147 1175 aa30.19■■■□□ 2.42
VEGFA-231ENST00000640499 POTEDQ86YR6 584 aa30.19■■■□□ 2.42
VEGFA-231ENST00000640499 AFAP1L1Q8TED9 768 aa30.19■■■□□ 2.42
VEGFA-231ENST00000640499 C17orf102A2RUQ5 167 aa30.18■■■□□ 2.42
VEGFA-231ENST00000640499 GAS7O60861 476 aa30.18■■■□□ 2.42
VEGFA-231ENST00000640499 CSF2RAP15509 400 aa30.18■■■□□ 2.42
VEGFA-231ENST00000640499 SWSAP1Q6NVH7 229 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms