RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 ADAM9Q13443 819 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 ZNF572Q7Z3I7 529 aaPredicted RBP18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 NAV1Q8NEY1 1877 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 POTEFA5A3E0 1075 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 FAM196BA6NMK8 535 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 GOLGA8KD6RF30 607 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 PLA2G4BP0C869 781 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 POTEIP0CG38 1075 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 CASP5P51878 434 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 SHROOM1Q2M3G4 852 aaPredicted RBP18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 CFAP58Q5T655 872 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 POTEGQ6S5H5 508 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 POTEEQ6S8J3 1075 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 EBAG9O00559 213 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 EIF3HO15372 352 aaKnown RBP eCLIP18.19■□□□□ 0.59e-9■■□□□ 12.4
HNRNPU-228ENST00000640306 TAL1P17542 331 aaPredicted RBP18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 SLC9A1P19634 815 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 NOP2P46087 812 aaKnown RBP18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 IFT20Q8IY31 132 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 SCFD1Q8WVM8 642 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 CASKIN2Q8WXE0 1202 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 SH3GL2Q99962 352 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 PSTPIP2Q9H939 334 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 GGA1Q9UJY5 639 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 DAGLAQ9Y4D2 1042 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 KCNK3O14649 394 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 SCNN1DP51172 638 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 GUCY1A3Q02108 690 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 ITIH3Q06033 890 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 HLTFQ14527 1009 aaKnown RBP eCLIP18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 EMILIN3Q9NT22 766 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 FAM169AQ9Y6X4 670 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 MAST2Q6P0Q8 1798 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 SRCAPQ6ZRS2 3230 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 BRWD3Q6RI45 1802 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 ZNF233A6NK53 670 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 KCNH2Q12809 1159 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 NAB2Q15742 525 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 PROM2Q8N271 834 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 CUL5Q93034 780 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 FAM107BQ9H098 131 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 POLLQ9UGP5 575 aa18.19■□□□□ 0.5
HNRNPU-228ENST00000640306 PNMA6FA0A0J9YX94 578 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 GRID2IPA4D2P6 1211 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 RAD51CO43502 376 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 PSMD2Q13200 908 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 ASIC2Q16515 512 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 SLC18A3Q16572 532 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 ASPRV1Q53RT3 343 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 DCAF17Q5H9S7 520 aaPredicted RBP18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 TCERG1LQ5VWI1 586 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 DDX42Q86XP3 938 aaKnown RBP eCLIP18.18■□□□□ 0.58e-7■■□□□ 11.8
HNRNPU-228ENST00000640306 TRIM59Q8IWR1 403 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 AP1M1Q9BXS5 423 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 TNRC6CQ9HCJ0 1690 aaKnown RBP18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 SHTN1A0MZ66 631 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 NR2F2P24468 414 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 ZNF543Q08ER8 600 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 MAATS1Q7Z4T9 603 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 CCDC65Q8IXS2 484 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 RNF10Q8N5U6 811 aaKnown RBP18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 PPM1EQ8WY54 764 aa18.18■□□□□ 0.5
HNRNPU-228ENST00000640306 ABCB11O95342 1321 aa18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 NDUFAB1O14561 156 aa18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 MED24O75448 989 aa18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 PLCG2P16885 1265 aa18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 PSMC6P62333 389 aa18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 PTK2Q05397 1052 aa18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 PABPC4Q13310 644 aaKnown RBP eCLIP18.17■□□□□ 0.52e-60■■□□□ 11.7
HNRNPU-228ENST00000640306 SPAG5Q96R06 1193 aa18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 HPDP32754 393 aaPredicted RBP18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 PRR5LQ6MZQ0 368 aa18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 CERS3Q8IU89 383 aa18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 OR2W6PQ8NHA6 318 aa18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 RNPC3Q96LT9 517 aaKnown RBP18.17■□□□□ 0.5
HNRNPU-228ENST00000640306 CYP11B2P19099 503 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 ALS2CLQ60I27 953 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 SLC30A10Q6XR72 485 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 TADA2BQ86TJ2 420 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 CAVIN3Q969G5 261 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 LRRC27Q9C0I9 530 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 IKZF4Q9H2S9 585 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 ZNF831Q5JPB2 1677 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 CEP104O60308 925 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 PAK2Q13177 524 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 MEI1Q5TIA1 1274 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 PPP4R3AQ6IN85 833 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 GJB7Q6PEY0 223 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 GDF3Q9NR23 364 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 TMCO5BA8MYB1 307 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 RBAK-RBAKDNI3L0D1 243 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 LY75O60449 1722 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 TTLL1O95922 423 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 SMARCA1P28370 1054 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 MRPL12P52815 198 aaKnown RBP18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 CYP4A11Q02928 519 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 ORC2Q13416 577 aaPredicted RBP18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 ZNF571Q7Z3V5 609 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms