RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 NTSR2O95665 410 aa12□□□□□ -0.49
SCN1B-208ENST00000640135 PRPSAP1Q14558 356 aa12□□□□□ -0.49
SCN1B-208ENST00000640135 CCDC6Q16204 474 aa12□□□□□ -0.49
SCN1B-208ENST00000640135 C7orf31Q8N865 590 aa12□□□□□ -0.49
SCN1B-208ENST00000640135 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
SCN1B-208ENST00000640135 FAM76AQ8TAV0 307 aa12□□□□□ -0.49
SCN1B-208ENST00000640135 TEX13BQ9BXU2 312 aa12□□□□□ -0.49
SCN1B-208ENST00000640135 ZFYVE28Q9HCC9 887 aa12□□□□□ -0.49
SCN1B-208ENST00000640135 RWDD2AQ9UIY3 292 aa12□□□□□ -0.49
SCN1B-208ENST00000640135 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.99□□□□□ -0.49
SCN1B-208ENST00000640135 GSG1L2A8MUP6 293 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 ARHGAP4P98171 946 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 WHAMMP3Q1A5X7 153 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 SGMS1Q86VZ5 419 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 PPANQ9NQ55 473 aaKnown RBP11.99□□□□□ -0.49
SCN1B-208ENST00000640135 SLC8A2Q9UPR5 921 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 BCORL1Q5H9F3 1711 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 CBX1P83916 185 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 NFX1Q12986 1120 aaKnown RBP11.99□□□□□ -0.49
SCN1B-208ENST00000640135 TAF1CQ15572 869 aaPredicted RBP11.99□□□□□ -0.49
SCN1B-208ENST00000640135 C10orf76Q5T2E6 689 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 INTS8Q75QN2 995 aaKnown RBP11.99□□□□□ -0.49
SCN1B-208ENST00000640135 THEM5Q8N1Q8 247 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 FAM149B1Q96BN6 582 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 NLRP4Q96MN2 994 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 MSTO1Q9BUK6 570 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 BHMT2Q9H2M3 363 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 THAP9Q9H5L6 903 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 TMEM63CQ9P1W3 806 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 PLEKHA8P1O95397 391 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 PLCG1P19174 1290 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 XPAP23025 273 aaPredicted RBP11.99□□□□□ -0.49
SCN1B-208ENST00000640135 ZNF827Q17R98 1081 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 DSTYKQ6XUX3 929 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 TBC1D10CQ8IV04 446 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 UBN2Q6ZU65 1347 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 SLC25A27O95847 323 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 RAET1EQ8TD07 263 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 FAM49AQ9H0Q0 323 aaPredicted RBP11.99□□□□□ -0.49
SCN1B-208ENST00000640135 WDR70Q9NW82 654 aa11.99□□□□□ -0.49
SCN1B-208ENST00000640135 CPSF3Q9UKF6 684 aaKnown RBP11.99□□□□□ -0.49
SCN1B-208ENST00000640135 SNAP23O00161 211 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 SRGAP2CP0DJJ0 459 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 SRGAP2BP0DMP2 458 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 CIITAP33076 1130 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 QARSP47897 775 aaKnown RBP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 PLCB4Q15147 1175 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 QRICH1Q2TAL8 776 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 ZNF280CQ8ND82 737 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 ENOX1Q8TC92 643 aaKnown RBP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 CCDC68Q9H2F9 335 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 ZNF302Q9NR11 478 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 BARHL2Q9NY43 387 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 LCMT1Q9UIC8 334 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 IQSEC2Q5JU85 1478 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 IFRD2Q12894 506 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 MB21D2Q8IYB1 491 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 LRRC7Q96NW7 1537 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 MEIS1O00470 390 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 IFNB1P01574 187 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 PSMC4P43686 418 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 SREBF2Q12772 1141 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 VPS52Q8N1B4 723 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 SIX6OS1Q8N1H7 587 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 URGCPQ8TCY9 931 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 FTOQ9C0B1 505 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 ALDH8A1Q9H2A2 487 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 ZNF70Q9UC06 446 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 PVALEFA0A1B0GWK0 134 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 F8W8V4 182 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 GTF2F1P35269 517 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 RNASE9P60153 205 aaKnown RBP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 PSMC5P62195 406 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 BFSP1Q12934 665 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 ZNF449Q6P9G9 518 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 UNC13DQ70J99 1090 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 ATG9AQ7Z3C6 839 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 NBPF11Q86T75 865 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 RNF139Q8WU17 664 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 SPZ1Q9BXG8 430 aa11.98□□□□□ -0.49
SCN1B-208ENST00000640135 GPBP1L1Q9HC44 474 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 EPN1Q9Y6I3 576 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-208ENST00000640135 RIOK3O14730 519 aaKnown RBP11.97□□□□□ -0.49
SCN1B-208ENST00000640135 CLDN3O15551 220 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 CETPP11597 493 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 ITPK1Q13572 414 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 KLHL7Q8IXQ5 586 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 CCDC121Q6ZUS5 278 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 ANKRD13AQ8IZ07 590 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 TIPINQ9BVW5 301 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 GCOM2Q9BZD3 368 aaPredicted RBP11.97□□□□□ -0.49
SCN1B-208ENST00000640135 VIMP08670 466 aaKnown RBP11.97□□□□□ -0.49
SCN1B-208ENST00000640135 DPEP1P16444 411 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 ARL4AP40617 200 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 CTTNQ14247 550 aaKnown RBP11.97□□□□□ -0.49
SCN1B-208ENST00000640135 TSGA10IPQ3SY00 556 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 ZNF667Q5HYK9 610 aa11.97□□□□□ -0.49
SCN1B-208ENST00000640135 PALM2Q8IXS6 379 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms