RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	DNM3	Q9UQ16	869 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	TRPM7	Q96QT4	1865 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	MAFG	O15525	162 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	COBL	O75128	1261 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	CCNE2	O96020	404 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	CACNB1	Q02641	598 aa	Predicted RBP	11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	EPHA7	Q15375	998 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	TAF1C	Q15572	869 aa	Predicted RBP	11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	UVSSA	Q2YD98	709 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	GNPTAB	Q3T906	1256 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	KLHL10	Q6JEL2	608 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	CYP4F22	Q6NT55	531 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	IFNL1	Q8IU54	200 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	HPS3	Q969F9	1004 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	BHMT2	Q9H2M3	363 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	MAGEF1	Q9HAY2	307 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	POLD4	Q9HCU8	107 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	GDA	Q9Y2T3	454 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	SPATA31C2	B4DYI2	1134 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	GOLGA6L19	H0YKK7	550 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	MYL1	P05976	194 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	IDE	P14735	1019 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	KCNA2	P16389	499 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	ADORA2A	P29274	412 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	MLKL	Q8NB16	471 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	CCDC102A	Q96A19	550 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	LXN	Q9BS40	222 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	STK24	Q9Y6E0	443 aa		11.69	□□□□□ -0.54
NECAP1-223	ENST00000640091	STAM2	O75886	525 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	EDNRB	P24530	442 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	SLC12A3	P55017	1021 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	FAM110C	Q1W6H9	321 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	ARSH	Q5FYA8	562 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	GPR142	Q7Z601	462 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	TRMT44	Q8IYL2	757 aa	Known RBP	11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	ANP32B	Q92688	251 aa	Known RBP	11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	MED15	Q96RN5	788 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	TUFT1	Q9NNX1	390 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	IVNS1ABP	Q9Y6Y0	642 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	PPP1R3G	B7ZBB8	358 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	STX17	P56962	302 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	STK4	Q13043	487 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	NCAPH	Q15003	741 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	CYFIP1	Q7L576	1253 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	GPBP1	Q86WP2	473 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	CDHR1	Q96JP9	859 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	SH2D3A	Q9BRG2	576 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	RMND1	Q9NWS8	449 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	TCEAL9	Q9UHQ7	104 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	LCT	P09848	1927 aa		11.68	□□□□□ -0.54
NECAP1-223	ENST00000640091	STRN	O43815	780 aa		11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	RHOBTB3	O94955	611 aa		11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	P4HB	P07237	508 aa	Known RBP	11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	CYP11B2	P19099	503 aa		11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	PRCP	P42785	496 aa		11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	INHBE	P58166	350 aa		11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	LY6K	Q17RY6	165 aa		11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	HSP90AA4P	Q58FG1	418 aa		11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	SYT2	Q8N9I0	419 aa	Predicted RBP	11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	DNAJC19	Q96DA6	116 aa		11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	BPIFA3	Q9BQP9	254 aa		11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	JPH1	Q9HDC5	661 aa	Predicted RBP	11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.67	□□□□□ -0.54
NECAP1-223	ENST00000640091	WDR64	B1ANS9	1081 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	SLC26A4	O43511	780 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	KRT18	P05783	430 aa	Known RBP	11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	KRT76	Q01546	638 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	KCNB1	Q14721	858 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	UGCG	Q16739	394 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	ZNF792	Q3KQV3	632 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	TMEM63B	Q5T3F8	832 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	DPP9	Q86TI2	863 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	FBXO16	Q8IX29	292 aa	Predicted RBP	11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	NACC1	Q96RE7	527 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	LRRC27	Q9C0I9	530 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	ZHX3	Q9H4I2	956 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	SLC39A2	Q9NP94	309 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	EXOC1	Q9NV70	894 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	SLC9A2	Q9UBY0	812 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	CENPF	P49454	3210 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	TMEM150B	A6NC51	233 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091		B4DLN1	442 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	TLR2	O60603	784 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	ADCY5	O95622	1261 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	EYA4	O95677	639 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	ICAM3	P32942	547 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	QARS	P47897	775 aa	Known RBP	11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	CRHR2	Q13324	411 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	SWSAP1	Q6NVH7	229 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	UNC13D	Q70J99	1090 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	PLEKHH3	Q7Z736	793 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	RUSC1	Q9BVN2	902 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	HSD3B7	Q9H2F3	369 aa		11.66	□□□□□ -0.54
NECAP1-223	ENST00000640091	ZSWIM4	Q9H7M6	989 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms