RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 U2AF2P26368 475 aaKnown RBP eCLIP9.07□□□□□ -0.96
SCARB2-220ENST00000640076 CALML3P27482 149 aa9.07□□□□□ -0.96
SCARB2-220ENST00000640076 HOXA7P31268 230 aaPredicted RBP9.07□□□□□ -0.96
SCARB2-220ENST00000640076 ST13P50502 369 aaKnown RBP9.07□□□□□ -0.96
SCARB2-220ENST00000640076 FSTL1Q12841 308 aa9.07□□□□□ -0.96
SCARB2-220ENST00000640076 COG2Q14746 738 aa9.07□□□□□ -0.96
SCARB2-220ENST00000640076 SAFBQ15424 915 aaKnown RBP eCLIP9.07□□□□□ -0.96
SCARB2-220ENST00000640076 FASTKD5Q7L8L6 764 aaKnown RBP9.07□□□□□ -0.96
SCARB2-220ENST00000640076 FBXO11Q86XK2 927 aa9.07□□□□□ -0.96
SCARB2-220ENST00000640076 CCDC12Q8WUD4 166 aaPredicted RBP9.07□□□□□ -0.96
SCARB2-220ENST00000640076 ZMYND12Q9H0C1 365 aa9.07□□□□□ -0.96
SCARB2-220ENST00000640076 SLC38A10Q9HBR0 1119 aa9.07□□□□□ -0.96
SCARB2-220ENST00000640076 AGTPBP1Q9UPW5 1226 aa9.07□□□□□ -0.96
SCARB2-220ENST00000640076 PCDHB11Q9Y5F2 797 aa9.07□□□□□ -0.96
SCARB2-220ENST00000640076 PCDHA1Q9Y5I3 950 aa9.07□□□□□ -0.96
SCARB2-220ENST00000640076 MRVI1Q9Y6F6 885 aa9.07□□□□□ -0.96
SCARB2-220ENST00000640076 TMEM229AB2RXF0 380 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 BTBD18B2RXH4 712 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 VWA5AO00534 786 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 EIF1AYO14602 144 aaKnown RBP9.06□□□□□ -0.96
SCARB2-220ENST00000640076 ADAMTS3O15072 1205 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 GNALP38405 381 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 NR5A1Q13285 461 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 ORC1Q13415 861 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 GALNT17Q6IS24 598 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 CCDC174Q6PII3 467 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 CLEC17AQ6ZS10 378 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 RAVER1Q8IY67 606 aaKnown RBP9.06□□□□□ -0.96
SCARB2-220ENST00000640076 ATG4CQ96DT6 458 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 CHAMP1Q96JM3 812 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 FOXP1Q9H334 677 aaPredicted RBP9.06□□□□□ -0.96
SCARB2-220ENST00000640076 ADAMTS5Q9UNA0 930 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 ATP6V1DQ9Y5K8 247 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 TLL2Q9Y6L7 1015 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 MYPNQ86TC9 1320 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 COL11A1P12107 1806 aaPredicted RBP9.06□□□□□ -0.96
SCARB2-220ENST00000640076 SMCO2A6NFE2 343 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 OPLAHO14841 1288 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 CETPP11597 493 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 TAL1P17542 331 aaPredicted RBP9.06□□□□□ -0.96
SCARB2-220ENST00000640076 KRT2P35908 639 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 ZNF157P51786 506 aaPredicted RBP9.06□□□□□ -0.96
SCARB2-220ENST00000640076 CLCN6P51797 869 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 GTF2A2P52657 109 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 TRAF1Q13077 416 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 USH1GQ495M9 461 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 GPAT2Q6NUI2 795 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 RGMBQ6NW40 437 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 FAM173BQ6P4H8 233 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 BRAPQ7Z569 592 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 RASAL3Q86YV0 1011 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 NOSTRINQ8IVI9 506 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 TNS4Q8IZW8 715 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 BLIDQ8IZY5 108 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 DAGLBQ8NCG7 672 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 HNRNPLLQ8WVV9 542 aaKnown RBP9.06□□□□□ -0.96
SCARB2-220ENST00000640076 TNFRSF25Q93038 417 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 BRMS1Q9HCU9 246 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 HOXC10Q9NYD6 342 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 PCDHA4Q9UN74 947 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 ZNF536O15090 1300 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 MYH15Q9Y2K3 1946 aa9.06□□□□□ -0.96
SCARB2-220ENST00000640076 CCL15-CCL14A0A0B4J2E2 113 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
SCARB2-220ENST00000640076 ZBED4O75132 1171 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 BAG4O95429 457 aaKnown RBP9.05□□□□□ -0.96
SCARB2-220ENST00000640076 ICAM1P05362 532 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 GNA11P29992 359 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 ADCY7P51828 1080 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 IRX3P78415 501 aaPredicted RBP9.05□□□□□ -0.96
SCARB2-220ENST00000640076 CCL15Q16663 113 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 WDR78Q5VTH9 848 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 REPS2Q8NFH8 660 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 BRI3BPQ8WY22 251 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 APBA2Q99767 749 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 SPON2Q9BUD6 331 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 ASCC2Q9H1I8 757 aaPredicted RBP9.05□□□□□ -0.96
SCARB2-220ENST00000640076 TSPAN10Q9H1Z9 355 aaPredicted RBP9.05□□□□□ -0.96
SCARB2-220ENST00000640076 C6orf50Q9HD87 102 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 TMEM260Q9NX78 707 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 STRIP2Q9ULQ0 834 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 A0A0G2JMZ2 1700 aa9.05□□□□□ -0.96
SCARB2-220ENST00000640076 A0A1W2PRU2 124 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 OAZ1P54368 228 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 PABPC4Q13310 644 aaKnown RBP eCLIP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 FAM26DQ5JW98 314 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 CPXCR1Q8N123 301 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 BICD2Q8TD16 824 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 SLC39A13Q96H72 371 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 AGBL1Q96MI9 1066 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 GBP4Q96PP9 640 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 DNAJC7Q99615 494 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 DNAJC25Q9H1X3 360 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 PSTPIP2Q9H939 334 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 RAVER2Q9HCJ3 691 aaKnown RBP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 RIC8AQ9NPQ8 531 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 SEPT9Q9UHD8 586 aaPredicted RBP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 ZNF214Q9UL59 606 aaPredicted RBP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms