RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 TMEM59LQ9UK28 342 aa7.38□□□□□ -1.23
ATM-229ENST00000639953 EXOC6BQ9Y2D4 811 aa7.38□□□□□ -1.23
ATM-229ENST00000639953 CHURC1-FNTBB4DL54 471 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 PDE8AO60658 829 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 CILPO75339 1184 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 TSPAN15O95858 294 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 F13A1P00488 732 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 SRFP11831 508 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 YY1P25490 414 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 EPHA10Q5JZY3 1008 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 SND1Q7KZF4 910 aaKnown RBP eCLIP7.37□□□□□ -1.23
ATM-229ENST00000639953 RPAP2Q8IXW5 612 aaPredicted RBP7.37□□□□□ -1.23
ATM-229ENST00000639953 DTWD2Q8NBA8 298 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 FBXO15Q8NCQ5 510 aaPredicted RBP7.37□□□□□ -1.23
ATM-229ENST00000639953 MYLIPQ8WY64 445 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 IL25Q9H293 177 aa7.37□□□□□ -1.23
ATM-229ENST00000639953 CDHR2Q9BYE9 1310 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 PATL2C9JE40 543 aaKnown RBP7.36□□□□□ -1.23
ATM-229ENST00000639953 HPXP02790 462 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 ALDH1B1P30837 517 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 ST13P50502 369 aaKnown RBP7.36□□□□□ -1.23
ATM-229ENST00000639953 CCT4P50991 539 aaKnown RBP7.36□□□□□ -1.23
ATM-229ENST00000639953 CTSWP56202 376 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 GRAPQ13588 217 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 SF3B3Q15393 1217 aaKnown RBP7.36□□□□□ -1.23
ATM-229ENST00000639953 TTC22Q5TAA0 569 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 C9orf131Q5VYM1 1079 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 DNAJC14Q6Y2X3 702 aaPredicted RBP7.36□□□□□ -1.23
ATM-229ENST00000639953 LCNL1Q6ZST4 164 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 DDX46Q7L014 1031 aaKnown RBP7.36□□□□□ -1.23
ATM-229ENST00000639953 TMC4Q7Z404 712 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 BAHD1Q8TBE0 780 aaPredicted RBP7.36□□□□□ -1.23
ATM-229ENST00000639953 GRAPLQ8TC17 118 aaPredicted RBP7.36□□□□□ -1.23
ATM-229ENST00000639953 CELF1Q92879 486 aaKnown RBP7.36□□□□□ -1.23
ATM-229ENST00000639953 CRAMP1Q96RY5 1269 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 PPP1R16BQ96T49 567 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 GPR62Q9BZJ7 368 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 ANTXR1Q9H6X2 564 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 SP110Q9HB58 689 aa7.36□□□□□ -1.23
ATM-229ENST00000639953 DCP1AQ9NPI6 582 aaPredicted RBP7.36□□□□□ -1.23
ATM-229ENST00000639953 TIAM2Q8IVF5 1701 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 DICER1Q9UPY3 1922 aaKnown RBP7.35□□□□□ -1.23
ATM-229ENST00000639953 MINDY4BA8MYZ0 360 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 GRM8O00222 908 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 ALDH1L1O75891 902 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 GNAI2P04899 355 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 RAC2P15153 192 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 SDSP20132 328 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 FOXO4P98177 505 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 EGR3Q06889 387 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 CCDC93Q567U6 631 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 BMP2KLQ5H9B9 411 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 TMEM201Q5SNT2 666 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 LRRC56Q8IYG6 542 aaPredicted RBP7.35□□□□□ -1.23
ATM-229ENST00000639953 TTLL11Q8NHH1 800 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 CYB5D2Q8WUJ1 264 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 GATAD2BQ8WXI9 593 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 SUCLG2Q96I99 432 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 TOX2Q96NM4 488 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 C22orf23Q9BZE7 217 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 GREM2Q9H772 168 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 C9orf78Q9NZ63 289 aaPredicted RBP7.35□□□□□ -1.23
ATM-229ENST00000639953 RNF181Q9P0P0 153 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 DUSP13Q9UII6 198 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 PA2G4Q9UQ80 394 aaKnown RBP7.35□□□□□ -1.23
ATM-229ENST00000639953 POLR3KQ9Y2Y1 108 aaPredicted RBP7.35□□□□□ -1.23
ATM-229ENST00000639953 LRRC37AA6NMS7 1700 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 SNED1Q8TER0 1413 aa7.35□□□□□ -1.23
ATM-229ENST00000639953 NFIBO00712 420 aa7.34□□□□□ -1.23
ATM-229ENST00000639953 BPNT1O95861 308 aa7.34□□□□□ -1.23
ATM-229ENST00000639953 LMNB2Q03252 620 aa7.34□□□□□ -1.23
ATM-229ENST00000639953 CCDC152Q4G0S7 254 aa7.34□□□□□ -1.23
ATM-229ENST00000639953 CCDC84Q86UT8 332 aaPredicted RBP7.34□□□□□ -1.23
ATM-229ENST00000639953 TSPYL5Q86VY4 417 aaPredicted RBP7.34□□□□□ -1.23
ATM-229ENST00000639953 SSH3Q8TE77 659 aa7.34□□□□□ -1.23
ATM-229ENST00000639953 ZNF526Q8TF50 670 aaPredicted RBP7.34□□□□□ -1.23
ATM-229ENST00000639953 TRIT1Q9H3H1 467 aaKnown RBP7.34□□□□□ -1.23
ATM-229ENST00000639953 IL1RAPL2Q9NP60 686 aa7.34□□□□□ -1.23
ATM-229ENST00000639953 ZNF277Q9NRM2 450 aaPredicted RBP7.34□□□□□ -1.23
ATM-229ENST00000639953 GPATCH2Q9NW75 528 aa7.34□□□□□ -1.23
ATM-229ENST00000639953 ATP6V0A2Q9Y487 856 aa7.34□□□□□ -1.23
ATM-229ENST00000639953 COL4A5P29400 1685 aa7.34□□□□□ -1.23
ATM-229ENST00000639953 DNAJA2O60884 412 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 BBOX1O75936 387 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 MAP4K4O95819 1239 aaPredicted RBP7.33□□□□□ -1.24
ATM-229ENST00000639953 CSF1RP07333 972 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 ZGLP1P0C6A0 271 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 TMEM253P0C7T8 217 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 GBP2P32456 591 aaPredicted RBP7.33□□□□□ -1.24
ATM-229ENST00000639953 PDE1AP54750 535 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 RPS8P62241 208 aaKnown RBP7.33□□□□□ -1.24
ATM-229ENST00000639953 GPSM2P81274 684 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 FAM160A1Q05DH4 1040 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 TIGD5Q53EQ6 642 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 LMBR1LQ6UX01 489 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 ATG14Q6ZNE5 492 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 FBXO33Q7Z6M2 555 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 RELL1Q8IUW5 271 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 FBXO27Q8NI29 283 aa7.33□□□□□ -1.24
ATM-229ENST00000639953 KCNN1Q92952 543 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms