RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 A0A1W2PRG0 241 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 SPDYE3A6NKU9 549 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 OPLAHO14841 1288 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 NOL4O94818 638 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 SPATA31C1P0DKV0 1188 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 SREBF1P36956 1147 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 MMP14P50281 582 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 USP14P54578 494 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 FAM193AP78312 1265 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 RBM26Q5T8P6 1007 aaKnown RBP20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 HAUS3Q68CZ6 603 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 PRMT6Q96LA8 375 aaPredicted RBP20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 EDEM3Q9BZQ6 932 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 NLRC4Q9NPP4 1024 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 RNF216Q9NWF9 866 aaPredicted RBP20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 CAPN6Q9Y6Q1 641 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 ATRNL1Q5VV63 1379 aa20.9■□□□□ 0.94
CROCCP2-206ENST00000639594 PITPNM2Q9BZ72 1349 aa20.89■□□□□ 0.94
CROCCP2-206ENST00000639594 TBX3O15119 743 aa20.89■□□□□ 0.94
CROCCP2-206ENST00000639594 HOXA13P31271 388 aaPredicted RBP20.89■□□□□ 0.94
CROCCP2-206ENST00000639594 MCTP2Q6DN12 878 aa20.89■□□□□ 0.94
CROCCP2-206ENST00000639594 WDR93Q6P2C0 686 aa20.89■□□□□ 0.94
CROCCP2-206ENST00000639594 H3BQF6 201 aa20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 PDE2AO00408 941 aaPredicted RBP20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 ENTPD3O75355 529 aa20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 MOCS3O95396 460 aa20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 PABPC4Q13310 644 aaKnown RBP eCLIP20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 GIT2Q14161 759 aa20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 ASTE1Q2TB18 679 aaPredicted RBP20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 HGSNATQ68CP4 663 aa20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 TRIM59Q8IWR1 403 aa20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 LSM14BQ9BX40 385 aaKnown RBP20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 JADE2Q9NQC1 790 aa20.89■□□□□ 0.93
CROCCP2-206ENST00000639594 GNA14O95837 355 aa20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 FOSP01100 380 aaPredicted RBP20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 RPA1P27694 616 aa20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 CASP5P51878 434 aa20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 MARSP56192 900 aaKnown RBP20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 CKAP4Q07065 602 aaKnown RBP20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 R3HDM1Q15032 1099 aaKnown RBP20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 BTNL9Q6UXG8 535 aa20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 SPICE1Q8N0Z3 855 aa20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 TRIM58Q8NG06 486 aa20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 CEP72Q9P209 647 aa20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 PSME4Q14997 1843 aa20.88■□□□□ 0.93
CROCCP2-206ENST00000639594 MSH4O15457 936 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 TACC1O75410 805 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 TUBBP07437 444 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 APBA1Q02410 837 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 GFPT1Q06210 699 aaPredicted RBP20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 MAPK8IP2Q13387 824 aaPredicted RBP20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 ADAM9Q13443 819 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 ZC3H3Q8IXZ2 948 aaKnown RBP20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 SYT2Q8N9I0 419 aaPredicted RBP20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 ERMNQ8TAM6 284 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 CYP2W1Q8TAV3 490 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 CSRNP1Q96S65 589 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 CRACR2AQ9BSW2 395 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 GBP3Q9H0R5 595 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 DNM3Q9UQ16 869 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 MAGEA1P43355 309 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 FAM83BQ5T0W9 1011 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 CAGE1Q8TC20 777 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 PRR12Q9ULL5 1215 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 JRKLQ9Y4A0 524 aa20.87■□□□□ 0.93
CROCCP2-206ENST00000639594 YDJCA8MPS7 323 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 TLR2O60603 784 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 CIITAP33076 1130 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 POLR2FP61218 127 aaKnown RBP20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 TTLL6Q8N841 843 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 ZBTB9Q96C00 473 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 RPGRIP1Q96KN7 1286 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 DRC1Q96MC2 740 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 FAM20AQ96MK3 541 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 REEP2Q9BRK0 252 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 PDE11AQ9HCR9 933 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 SALL4Q9UJQ4 1053 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 UTRNP46939 3433 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 SSU72P8A0A1W2PR75 194 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 PJA2O43164 708 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 TDRD12Q587J7 1177 aaKnown RBP20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 SNX12Q9UMY4 172 aa20.86■□□□□ 0.93
CROCCP2-206ENST00000639594 ECE1P42892 770 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 CASP8Q14790 479 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 EDRF1Q3B7T1 1238 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 KIAA1755Q5JYT7 1200 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 SFMBT2Q5VUG0 894 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 CC2D2BQ6DHV5 1058 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 ARHGAP27Q6ZUM4 889 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 SFR1Q86XK3 245 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 ANKRD13CQ8N6S4 541 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 VAV3Q9UKW4 847 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 CYP2C19P33261 490 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 HOXD13P35453 343 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 RASSF7Q02833 373 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 CYP4A11Q02928 519 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 PPP4R3CPQ6ZMV5 832 aa20.85■□□□□ 0.93
CROCCP2-206ENST00000639594 CREG2Q8IUH2 290 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms