RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CEP89Q96ST8 783 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 GANQ9H2C0 597 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 TAF1DQ9H5J8 278 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-204ENST00000638725 TMEM59LQ9UK28 342 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 NPHP3-ACAD11A0A0J9YXS1 232 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 HMGB1P1B2RPK0 211 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-204ENST00000638725 E9PMD0 336 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 CLSTN1O94985 981 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 PDHBP11177 359 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 ACTN1P12814 892 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 TM4SF1P30408 202 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 RPS6KA1Q15418 735 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 SWT1Q5T5J6 900 aaKnown RBP11.98□□□□□ -0.49
SNIP1-204ENST00000638725 HAS1Q92839 578 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 CEP63Q96MT8 703 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 TMBIM4Q9HC24 238 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 COL16A1Q07092 1604 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-204ENST00000638725 E7EVH7 732 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 FSBPO95073 299 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 SMARCA1P28370 1054 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 HSD17B3P37058 310 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 SPATS2Q86XZ4 545 aaKnown RBP11.98□□□□□ -0.49
SNIP1-204ENST00000638725 TEX11Q8IYF3 940 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 LRRC47Q8N1G4 583 aaKnown RBP11.98□□□□□ -0.49
SNIP1-204ENST00000638725 SETDB2Q96T68 719 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 NYXQ9GZU5 481 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 ISCUQ9H1K1 167 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 AIPL1Q9NZN9 384 aa11.98□□□□□ -0.49
SNIP1-204ENST00000638725 COL5A3P25940 1745 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-204ENST00000638725 CEP104O60308 925 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 KIF4AO95239 1232 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 LDHCP07864 332 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 EPS15P42566 896 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 EIF6P56537 245 aaKnown RBP11.97□□□□□ -0.49
SNIP1-204ENST00000638725 UAP1Q16222 522 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-204ENST00000638725 RNF187Q5TA31 235 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-204ENST00000638725 MICALCLQ6ZW33 695 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 CLEC10AQ8IUN9 316 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 PAGR1Q9BTK6 254 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 AP1M1Q9BXS5 423 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 NEUROG2Q9H2A3 272 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 PPANQ9NQ55 473 aaKnown RBP11.97□□□□□ -0.49
SNIP1-204ENST00000638725 PLCB1Q9NQ66 1216 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 DDX25Q9UHL0 483 aaKnown RBP11.97□□□□□ -0.49
SNIP1-204ENST00000638725 MARCH6O60337 910 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 PTK2Q05397 1052 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 KCNH2Q12809 1159 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 ZNF571Q7Z3V5 609 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-204ENST00000638725 C1orf131Q8NDD1 294 aaKnown RBP11.97□□□□□ -0.49
SNIP1-204ENST00000638725 SCFD1Q8WVM8 642 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 CDCA7Q9BWT1 371 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-204ENST00000638725 GPCPD1Q9NPB8 672 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 PCDHA2Q9Y5H9 948 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 SPATA31A1Q5TZJ5 1347 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 MYH4Q9Y623 1939 aa11.97□□□□□ -0.49
SNIP1-204ENST00000638725 GOLGA6L10A6NI86 522 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 GNA14O95837 355 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 HOXA7P31268 230 aaPredicted RBP11.96□□□□□ -0.49
SNIP1-204ENST00000638725 USP11P51784 963 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 MARSP56192 900 aaKnown RBP11.96□□□□□ -0.49
SNIP1-204ENST00000638725 IFT88Q13099 833 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 ADAM9Q13443 819 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 NFIXQ14938 502 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 HERC4Q5GLZ8 1057 aaPredicted RBP11.96□□□□□ -0.49
SNIP1-204ENST00000638725 SCFD2Q8WU76 684 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 KCTD10Q9H3F6 313 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 CDK5RAP2Q96SN8 1893 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 H0YGN5 161 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 hCG_1984214I3L0E3 225 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 FAM107AO95990 144 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 SLC9A1P19634 815 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 USP8P40818 1118 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 SEPT2Q15019 361 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 GPBP1Q86WP2 473 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 CCDC65Q8IXS2 484 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 ZNF713Q8N859 430 aaPredicted RBP11.96□□□□□ -0.49
SNIP1-204ENST00000638725 CABS1Q96KC9 395 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 DDX47Q9H0S4 455 aaKnown RBP11.96□□□□□ -0.49
SNIP1-204ENST00000638725 ZHX3Q9H4I2 956 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 BMP2KQ9NSY1 1161 aaPredicted RBP11.96□□□□□ -0.49
SNIP1-204ENST00000638725 EMILIN3Q9NT22 766 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 KIAA1024Q9UPX6 916 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 NFS1Q9Y697 457 aa11.96□□□□□ -0.49
SNIP1-204ENST00000638725 POTEB3A0JP26 581 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 POTECB2RU33 542 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 GCOM1H8Y6P7 765 aaPredicted RBP11.96□□□□□ -0.5
SNIP1-204ENST00000638725 PPP1R11O60927 126 aaPredicted RBP11.96□□□□□ -0.5
SNIP1-204ENST00000638725 MYZAPP0CAP1 466 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 CTNNA1P35221 906 aaKnown RBP11.96□□□□□ -0.5
SNIP1-204ENST00000638725 FLT3P36888 993 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 PPP4R3AQ6IN85 833 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 POTEBQ6S5H4 581 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 LRIG3Q6UXM1 1119 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 IRF2BP2Q7Z5L9 587 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 YTHDF3Q7Z739 585 aaKnown RBP11.96□□□□□ -0.5
SNIP1-204ENST00000638725 METTL13Q8N6R0 699 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 NCAPGQ9BPX3 1015 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 PCDHA12Q9UN75 941 aa11.96□□□□□ -0.5
SNIP1-204ENST00000638725 SART1O43290 800 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms