RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 SH2D4AQ9H788 454 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 NHEJ1Q9H9Q4 299 aaPredicted RBP13.29□□□□□ -0.28
GFAP-228ENST00000638488 EPB41L5Q9HCM4 733 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 PANK4Q9NVE7 773 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 GPR75-ASB3A0A0A6YYF3 556 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 F8W031 263 aaPredicted RBP13.28□□□□□ -0.28
GFAP-228ENST00000638488 ASAP2O43150 1006 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 MRPS35P82673 323 aaKnown RBP13.28□□□□□ -0.28
GFAP-228ENST00000638488 LBRQ14739 615 aaKnown RBP13.28□□□□□ -0.28
GFAP-228ENST00000638488 GRIK5Q16478 980 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 SGSM1Q2NKQ1 1148 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 ANKRD20A2Q5SQ80 823 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 ANKRD20A1Q5TYW2 823 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 ANKRD20A3Q5VUR7 823 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 PRR5LQ6MZQ0 368 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 NOC3LQ8WTT2 800 aaKnown RBP13.28□□□□□ -0.28
GFAP-228ENST00000638488 PAGE5Q96GU1 130 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 ASB3Q9Y575 518 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 LDHBP07195 334 aaKnown RBP13.28□□□□□ -0.28
GFAP-228ENST00000638488 NQO1P15559 274 aaKnown RBP13.28□□□□□ -0.28
GFAP-228ENST00000638488 PAK1Q13153 545 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 CUL3Q13618 768 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 GNPTABQ3T906 1256 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 CFAP221Q4G0U5 840 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 ATL2Q8NHH9 583 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 SUDS3Q9H7L9 328 aaPredicted RBP13.28□□□□□ -0.28
GFAP-228ENST00000638488 CABP5Q9NP86 173 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 V9GY48 417 aaPredicted RBP13.28□□□□□ -0.28
GFAP-228ENST00000638488 THSD7AQ9UPZ6 1657 aa13.28□□□□□ -0.28
GFAP-228ENST00000638488 H0YGN5 161 aa13.27□□□□□ -0.28
GFAP-228ENST00000638488 TOB1P50616 345 aaPredicted RBP13.27□□□□□ -0.28
GFAP-228ENST00000638488 MRPS25P82663 173 aaKnown RBP13.27□□□□□ -0.28
GFAP-228ENST00000638488 GUCY2DQ02846 1103 aa13.27□□□□□ -0.28
GFAP-228ENST00000638488 TBC1D1Q86TI0 1168 aaPredicted RBP13.27□□□□□ -0.28
GFAP-228ENST00000638488 LRRC45Q96CN5 670 aa13.27□□□□□ -0.28
GFAP-228ENST00000638488 MMTAG2Q9BU76 263 aaKnown RBP13.27□□□□□ -0.28
GFAP-228ENST00000638488 NFS1Q9Y697 457 aa13.27□□□□□ -0.28
GFAP-228ENST00000638488 CAPN6Q9Y6Q1 641 aa13.27□□□□□ -0.28
GFAP-228ENST00000638488 DUOX1Q9NRD9 1551 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 RGL2O15211 777 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 ATP2A2P16615 1042 aaKnown RBP13.27□□□□□ -0.29
GFAP-228ENST00000638488 CDC25CP30307 473 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 GUCY2FP51841 1108 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 LMNB2Q03252 620 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 SPA17Q15506 151 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 C1QTNF12Q5T7M4 302 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 NFRKBQ6P4R8 1299 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 IFT81Q8WYA0 676 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 NAF1Q96HR8 494 aaKnown RBP13.27□□□□□ -0.29
GFAP-228ENST00000638488 RBM41Q96IZ5 413 aaKnown RBP13.27□□□□□ -0.29
GFAP-228ENST00000638488 PCDHB6Q9Y5E3 794 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 DUSP10Q9Y6W6 482 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 PDS5AQ29RF7 1337 aaKnown RBP13.27□□□□□ -0.29
GFAP-228ENST00000638488 COL24A1Q17RW2 1714 aa13.27□□□□□ -0.29
GFAP-228ENST00000638488 FAM205CA6NFA0 338 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 UFL1O94874 794 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 PYGBP11216 843 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 TMOD1P28289 359 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 ALDH3A1P30838 453 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 GPSM2P81274 684 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 ZNF844Q08AG5 666 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 DYNC1I2Q13409 638 aaKnown RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 LRRC23Q53EV4 343 aaPredicted RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 HHATQ5VTY9 493 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 SMYD4Q8IYR2 804 aaPredicted RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 ZNF507Q8TCN5 953 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 SH3RF3Q8TEJ3 882 aaPredicted RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 TEKT4Q8WW24 435 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 CASKIN2Q8WXE0 1202 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 DYNLL2Q96FJ2 89 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 FAM129AQ9BZQ8 928 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 TTYH3Q9C0H2 523 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 TRPC5Q9UL62 973 aaPredicted RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 GRID2IPA4D2P6 1211 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 PHF20L1A8MW92 1017 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 H7C1D1 291 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 FLOT1O75955 427 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 WFS1O76024 890 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 SERPINB2P05120 415 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 GYS1P13807 737 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 ZNF131P52739 623 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 MXRA7P84157 204 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 ZBED6P86452 979 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 CSRNP2Q9H175 543 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 FOXP1Q9H334 677 aaPredicted RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 QTRT2Q9H974 415 aaKnown RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 ATP8A2Q9NTI2 1148 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 WDR35Q9P2L0 1181 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 XDHP47989 1333 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 TAF1LQ8IZX4 1826 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 MYH10P35580 1976 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 DPPA5A6NC42 116 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 KIF4AO95239 1232 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 EEF1GP26641 437 aaKnown RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 HSD17B3P37058 310 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 RANBP1P43487 201 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 AFMP43652 599 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms