RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 HNRNPH3P31942 346 aaKnown RBP23.79■■□□□ 1.4
CLN6-224ENST00000638076 SRGAP1Q7Z6B7 1085 aa23.79■■□□□ 1.4
CLN6-224ENST00000638076 BHMT2Q9H2M3 363 aa23.79■■□□□ 1.4
CLN6-224ENST00000638076 FEM1BQ9UK73 627 aa23.79■■□□□ 1.4
CLN6-224ENST00000638076 KIF13BQ9NQT8 1826 aa23.79■■□□□ 1.4
CLN6-224ENST00000638076 ASNSP08243 561 aa23.79■■□□□ 1.4
CLN6-224ENST00000638076 PLEKP08567 350 aaPredicted RBP23.79■■□□□ 1.4
CLN6-224ENST00000638076 CASP5P51878 434 aa23.79■■□□□ 1.4
CLN6-224ENST00000638076 GPR161Q8N6U8 529 aaKnown RBP23.79■■□□□ 1.4
CLN6-224ENST00000638076 CCDC42Q96M95 316 aa23.79■■□□□ 1.4
CLN6-224ENST00000638076 MYOZ2Q9NPC6 264 aa23.79■■□□□ 1.4
CLN6-224ENST00000638076 ARGLU1Q9NWB6 273 aaPredicted RBP23.79■■□□□ 1.4
CLN6-224ENST00000638076 PIM2Q9P1W9 311 aa23.79■■□□□ 1.4
CLN6-224ENST00000638076 GNA14O95837 355 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 CHMP4BP1P59074 171 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 ZNF662Q6ZS27 426 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 OTOP1Q7RTM1 612 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 LDHDQ86WU2 507 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 SFR1Q86XK3 245 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 CEP112Q8N8E3 955 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 SMCR8Q8TEV9 937 aaPredicted RBP23.78■■□□□ 1.4
CLN6-224ENST00000638076 JAKMIP2Q96AA8 810 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 PUF60Q9UHX1 559 aaKnown RBP23.78■■□□□ 1.4
CLN6-224ENST00000638076 MAP3K10Q02779 954 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 KCNMA1Q12791 1236 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 LRCH2Q5VUJ6 765 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 CIAPIN1Q6FI81 312 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 RABGAP1Q9Y3P9 1069 aa23.78■■□□□ 1.4
CLN6-224ENST00000638076 KRT86O43790 486 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 MARSP56192 900 aaKnown RBP23.77■■□□□ 1.4
CLN6-224ENST00000638076 CYP27A1Q02318 531 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 ADAM9Q13443 819 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 RRAGAQ7L523 313 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 NEK11Q8NG66 645 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 RABGGTAQ92696 567 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 ARHGAP20Q9P2F6 1191 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 RCCD1A6NED2 376 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 LRRC53A6NM62 1247 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 CHMP2AO43633 222 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 PSMD10O75832 226 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 EYA4O95677 639 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 CTTNQ14247 550 aaKnown RBP23.77■■□□□ 1.4
CLN6-224ENST00000638076 EDRF1Q3B7T1 1238 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 PPP4R3CPQ6ZMV5 832 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 HSD17B14Q9BPX1 270 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 RUSC1Q9BVN2 902 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 ZNF341Q9BYN7 854 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 LACRTQ9GZZ8 138 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 EHMT1Q9H9B1 1298 aa23.77■■□□□ 1.4
CLN6-224ENST00000638076 TFRCP02786 760 aaKnown RBP23.76■■□□□ 1.39
CLN6-224ENST00000638076 CEP55Q53EZ4 464 aa23.76■■□□□ 1.39
CLN6-224ENST00000638076 TRIM59Q8IWR1 403 aa23.76■■□□□ 1.39
CLN6-224ENST00000638076 ZC3H3Q8IXZ2 948 aaKnown RBP23.76■■□□□ 1.39
CLN6-224ENST00000638076 BAP1Q92560 729 aa23.76■■□□□ 1.39
CLN6-224ENST00000638076 ZFP91Q96JP5 570 aaPredicted RBP23.76■■□□□ 1.39
CLN6-224ENST00000638076 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.76■■□□□ 1.39
CLN6-224ENST00000638076 RSPH10B2B2RC85 870 aa23.76■■□□□ 1.39
CLN6-224ENST00000638076 RSPH10BP0C881 870 aa23.76■■□□□ 1.39
CLN6-224ENST00000638076 RASA3Q14644 834 aa23.76■■□□□ 1.39
CLN6-224ENST00000638076 SLC5A5Q92911 643 aa23.76■■□□□ 1.39
CLN6-224ENST00000638076 ZNF263O14978 683 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 ZSCAN20P17040 1043 aaPredicted RBP23.75■■□□□ 1.39
CLN6-224ENST00000638076 AMPD2Q01433 879 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 PPP2R5CQ13362 524 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 CACNA2D4Q7Z3S7 1137 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 TPH2Q8IWU9 490 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 PIGOQ8TEQ8 1089 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 JDP2Q8WYK2 163 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 DYDC2Q96IM9 177 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 POLD4Q9HCU8 107 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 CETN3O15182 167 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 SLITRK3O94933 977 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 MYBP10242 640 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 NR2F2P24468 414 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 INPP5BP32019 993 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 PTGER2P43116 358 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 SPA17Q15506 151 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 KNOP1Q1ED39 458 aaKnown RBP23.75■■□□□ 1.39
CLN6-224ENST00000638076 EPM2AIP1Q7L775 607 aaPredicted RBP23.75■■□□□ 1.39
CLN6-224ENST00000638076 KRT26Q7Z3Y9 468 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 KCTD17Q8N5Z5 321 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 TUFT1Q9NNX1 390 aa23.75■■□□□ 1.39
CLN6-224ENST00000638076 PHF20L1A8MW92 1017 aa23.74■■□□□ 1.39
CLN6-224ENST00000638076 GAS7O60861 476 aa23.74■■□□□ 1.39
CLN6-224ENST00000638076 TMCO3Q6UWJ1 677 aa23.74■■□□□ 1.39
CLN6-224ENST00000638076 AGBL1Q96MI9 1066 aa23.74■■□□□ 1.39
CLN6-224ENST00000638076 TAOK3Q9H2K8 898 aa23.74■■□□□ 1.39
CLN6-224ENST00000638076 MYO6Q9UM54 1294 aa23.74■■□□□ 1.39
CLN6-224ENST00000638076 TBCAO75347 108 aaKnown RBP23.73■■□□□ 1.39
CLN6-224ENST00000638076 PRPF6O94906 941 aaKnown RBP23.73■■□□□ 1.39
CLN6-224ENST00000638076 HOXD13P35453 343 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 EIF4A3P38919 411 aaKnown RBP23.73■■□□□ 1.39
CLN6-224ENST00000638076 VAV2P52735 878 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 WHAMMP3Q1A5X7 153 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 RINT1Q6NUQ1 792 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 PDXDC1Q6P996 788 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 GPIHBP1Q8IV16 184 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 EHBP1Q8NDI1 1231 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 PARD6BQ9BYG5 372 aa23.73■■□□□ 1.39
CLN6-224ENST00000638076 EDEM3Q9BZQ6 932 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms