RNA–Protein interactions for RNA: ENST00000637985.1

CLN3-264, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-264ENST00000637985 SORBS3O60504 671 aa19.03■□□□□ 0.64
CLN3-264ENST00000637985 DGKIO75912 1065 aa19.03■□□□□ 0.64
CLN3-264ENST00000637985 GGPS1O95749 300 aa19.03■□□□□ 0.64
CLN3-264ENST00000637985 SP2Q02086 613 aa19.03■□□□□ 0.64
CLN3-264ENST00000637985 CPVLQ9H3G5 476 aa19.03■□□□□ 0.64
CLN3-264ENST00000637985 CHRNA1P02708 482 aa19.02■□□□□ 0.64
CLN3-264ENST00000637985 CDC37Q16543 378 aaPredicted RBP19.02■□□□□ 0.64
CLN3-264ENST00000637985 GPATCH4Q5T3I0 446 aaKnown RBP19.02■□□□□ 0.64
CLN3-264ENST00000637985 RBM23Q86U06 439 aaKnown RBP19.02■□□□□ 0.64
CLN3-264ENST00000637985 SMC5Q8IY18 1101 aa19.02■□□□□ 0.64
CLN3-264ENST00000637985 NKD2Q969F2 451 aaPredicted RBP19.02■□□□□ 0.64
CLN3-264ENST00000637985 TTC14Q96N46 770 aa19.02■□□□□ 0.64
CLN3-264ENST00000637985 UBA5Q9GZZ9 404 aa19.02■□□□□ 0.64
CLN3-264ENST00000637985 EHMT1Q9H9B1 1298 aa19.02■□□□□ 0.64
CLN3-264ENST00000637985 MRPL42Q9Y6G3 142 aaKnown RBP19.02■□□□□ 0.64
CLN3-264ENST00000637985 ZNF292O60281 2723 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 LGALS2P05162 132 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 GOLGA8HP0CJ92 632 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 HSPD1P10809 573 aaKnown RBP19.01■□□□□ 0.63
CLN3-264ENST00000637985 GNAT1P11488 350 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 UBA1P22314 1058 aaKnown RBP19.01■□□□□ 0.63
CLN3-264ENST00000637985 ADAM17P78536 824 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 ADSSL1Q8N142 457 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 TMEM105Q8N8V8 129 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 KLHL23Q8NBE8 558 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 ATP8B4Q8TF62 1192 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 POF1BQ8WVV4 589 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 TOMM22Q9NS69 142 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 SETD4Q9NVD3 440 aa19.01■□□□□ 0.63
CLN3-264ENST00000637985 DNAH14Q0VDD8 3507 aa19■□□□□ 0.63
CLN3-264ENST00000637985 KIAA1671Q9BY89 1806 aa19■□□□□ 0.63
CLN3-264ENST00000637985 DMXL1Q9Y485 3027 aa19■□□□□ 0.63
CLN3-264ENST00000637985 TGFB3P10600 412 aa19■□□□□ 0.63
CLN3-264ENST00000637985 RRP12Q5JTH9 1297 aaKnown RBP19■□□□□ 0.63
CLN3-264ENST00000637985 FRMD5Q7Z6J6 570 aa19■□□□□ 0.63
CLN3-264ENST00000637985 CRIPAKQ8N1N5 446 aa19■□□□□ 0.63
CLN3-264ENST00000637985 TLE6Q9H808 572 aa19■□□□□ 0.63
CLN3-264ENST00000637985 HELLSQ9NRZ9 838 aa19■□□□□ 0.63
CLN3-264ENST00000637985 MRPL11Q9Y3B7 192 aaKnown RBP19■□□□□ 0.63
CLN3-264ENST00000637985 GHRP10912 638 aa18.99■□□□□ 0.63
CLN3-264ENST00000637985 ALX1Q15699 326 aa18.99■□□□□ 0.63
CLN3-264ENST00000637985 VPS53Q5VIR6 699 aa18.99■□□□□ 0.63
CLN3-264ENST00000637985 VSIG10LQ86VR7 867 aa18.99■□□□□ 0.63
CLN3-264ENST00000637985 CMTR2Q8IYT2 770 aaKnown RBP18.99■□□□□ 0.63
CLN3-264ENST00000637985 PDCD2LQ9BRP1 358 aa18.99■□□□□ 0.63
CLN3-264ENST00000637985 LNPKQ9C0E8 428 aa18.99■□□□□ 0.63
CLN3-264ENST00000637985 MLXIPQ9HAP2 919 aa18.99■□□□□ 0.63
CLN3-264ENST00000637985 PCDHGC5Q9Y5F6 944 aa18.99■□□□□ 0.63
CLN3-264ENST00000637985 MYCLP12524 364 aaPredicted RBP18.98■□□□□ 0.63
CLN3-264ENST00000637985 HSD17B4P51659 736 aa18.98■□□□□ 0.63
CLN3-264ENST00000637985 RBM10P98175 930 aaKnown RBP18.98■□□□□ 0.63
CLN3-264ENST00000637985 GHRHRQ02643 423 aa18.98■□□□□ 0.63
CLN3-264ENST00000637985 LPIN1Q14693 890 aa18.98■□□□□ 0.63
CLN3-264ENST00000637985 MCTP2Q6DN12 878 aa18.98■□□□□ 0.63
CLN3-264ENST00000637985 ZBTB33Q86T24 672 aa18.98■□□□□ 0.63
CLN3-264ENST00000637985 ADGRF4Q8IZF3 695 aa18.98■□□□□ 0.63
CLN3-264ENST00000637985 VN1R2Q8NFZ6 395 aa18.98■□□□□ 0.63
CLN3-264ENST00000637985 EXOC6Q8TAG9 804 aa18.98■□□□□ 0.63
CLN3-264ENST00000637985 USP26Q9BXU7 913 aa18.98■□□□□ 0.63
CLN3-264ENST00000637985 BCAS3Q9H6U6 928 aa18.98■□□□□ 0.63
CLN3-264ENST00000637985 MYO10Q9HD67 2058 aa18.97■□□□□ 0.63
CLN3-264ENST00000637985 OPLAHO14841 1288 aa18.97■□□□□ 0.63
CLN3-264ENST00000637985 CFBP00751 764 aa18.97■□□□□ 0.63
CLN3-264ENST00000637985 QRICH1Q2TAL8 776 aa18.97■□□□□ 0.63
CLN3-264ENST00000637985 STOX1Q6ZVD7 989 aa18.97■□□□□ 0.63
CLN3-264ENST00000637985 CHD1LQ86WJ1 897 aa18.97■□□□□ 0.63
CLN3-264ENST00000637985 KREMEN2Q8NCW0 462 aa18.97■□□□□ 0.63
CLN3-264ENST00000637985 LMBR1Q8WVP7 490 aa18.97■□□□□ 0.63
CLN3-264ENST00000637985 GPKOWQ92917 476 aaPredicted RBP eCLIP18.97■□□□□ 0.63
CLN3-264ENST00000637985 S1PR5Q9H228 398 aa18.97■□□□□ 0.63
CLN3-264ENST00000637985 CCDC171Q6TFL3 1326 aa18.97■□□□□ 0.63
CLN3-264ENST00000637985 EP300Q09472 2414 aaPredicted RBP18.96■□□□□ 0.63
CLN3-264ENST00000637985 EPG5Q9HCE0 2579 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 MYH6P13533 1939 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 MED19A0JLT2 244 aaPredicted RBP18.96■□□□□ 0.63
CLN3-264ENST00000637985 PER2O15055 1255 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 IGHDP01880 384 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 ARHGAP4P98171 946 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 MGAT3Q09327 533 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 MCMDC2Q4G0Z9 681 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 UBALD2Q8IYN6 164 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 LINC01599Q8WXQ3 324 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 NEK1Q96PY6 1258 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 SUPT16HQ9Y5B9 1047 aaKnown RBP18.96■□□□□ 0.63
CLN3-264ENST00000637985 PLXNA4Q9HCM2 1894 aa18.96■□□□□ 0.63
CLN3-264ENST00000637985 FSD2A1L4K1 749 aa18.95■□□□□ 0.62
CLN3-264ENST00000637985 NUCB1Q02818 461 aa18.95■□□□□ 0.62
CLN3-264ENST00000637985 PGM5Q15124 567 aa18.95■□□□□ 0.62
CLN3-264ENST00000637985 DUSP6Q16828 381 aa18.95■□□□□ 0.62
CLN3-264ENST00000637985 TMEM184AQ6ZMB5 413 aa18.95■□□□□ 0.62
CLN3-264ENST00000637985 IL31RAQ8NI17 732 aa18.95■□□□□ 0.62
CLN3-264ENST00000637985 CDCA3Q99618 268 aaPredicted RBP18.95■□□□□ 0.62
CLN3-264ENST00000637985 OSBPL3Q9H4L5 887 aa18.95■□□□□ 0.62
CLN3-264ENST00000637985 KAT6AQ92794 2004 aa18.95■□□□□ 0.62
CLN3-264ENST00000637985 TRIM6-TRIM34B2RNG4 842 aa18.94■□□□□ 0.62
CLN3-264ENST00000637985 NOP56O00567 594 aaKnown RBP18.94■□□□□ 0.62
CLN3-264ENST00000637985 BRD1O95696 1058 aa18.94■□□□□ 0.62
CLN3-264ENST00000637985 FGAP02671 866 aa18.94■□□□□ 0.62
CLN3-264ENST00000637985 MTMR3Q13615 1198 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms