RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 GJA3Q9Y6H8 435 aa18.34■□□□□ 0.53
CTSD-213ENST00000637915 UTRNP46939 3433 aa18.34■□□□□ 0.53
CTSD-213ENST00000637915 FZD9O00144 591 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 EYA4O95677 639 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 MAP3K9P80192 1104 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 ELF2Q15723 593 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 ARHGAP29Q52LW3 1261 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 CCDC125Q86Z20 511 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 IQCDQ96DY2 449 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 HOOK2Q96ED9 719 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 ZFP91Q96JP5 570 aaPredicted RBP18.33■□□□□ 0.53
CTSD-213ENST00000637915 CEP63Q96MT8 703 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 TUFT1Q9NNX1 390 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 CNOT7Q9UIV1 285 aaKnown RBP18.33■□□□□ 0.53
CTSD-213ENST00000637915 RABGAP1Q9Y3P9 1069 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 CD2APQ9Y5K6 639 aa18.33■□□□□ 0.53
CTSD-213ENST00000637915 CHMP2AO43633 222 aa18.33■□□□□ 0.52
CTSD-213ENST00000637915 SLITRK3O94933 977 aa18.33■□□□□ 0.52
CTSD-213ENST00000637915 ABL1P00519 1130 aa18.33■□□□□ 0.52
CTSD-213ENST00000637915 ERCC3P19447 782 aa18.33■□□□□ 0.52
CTSD-213ENST00000637915 ARHGAP25P42331 645 aa18.33■□□□□ 0.52
CTSD-213ENST00000637915 CASP5P51878 434 aa18.33■□□□□ 0.52
CTSD-213ENST00000637915 SETQ01105 290 aaPredicted RBP18.33■□□□□ 0.52
CTSD-213ENST00000637915 SGIP1Q9BQI5 828 aa18.33■□□□□ 0.52
CTSD-213ENST00000637915 RUSC1Q9BVN2 902 aa18.33■□□□□ 0.52
CTSD-213ENST00000637915 NFIBO00712 420 aa18.32■□□□□ 0.52
CTSD-213ENST00000637915 GAS7O60861 476 aa18.32■□□□□ 0.52
CTSD-213ENST00000637915 ARP10275 920 aa18.32■□□□□ 0.52
CTSD-213ENST00000637915 CTTNQ14247 550 aaKnown RBP18.32■□□□□ 0.52
CTSD-213ENST00000637915 SFR1Q86XK3 245 aa18.32■□□□□ 0.52
CTSD-213ENST00000637915 ZC3H3Q8IXZ2 948 aaKnown RBP18.32■□□□□ 0.52
CTSD-213ENST00000637915 CLEC4DQ8WXI8 215 aa18.32■□□□□ 0.52
CTSD-213ENST00000637915 DYDC2Q96IM9 177 aa18.32■□□□□ 0.52
CTSD-213ENST00000637915 ZNF577Q9BSK1 485 aa18.32■□□□□ 0.52
CTSD-213ENST00000637915 COL20A1Q9P218 1284 aa18.32■□□□□ 0.52
CTSD-213ENST00000637915 MRFAP1Q9Y605 127 aa18.32■□□□□ 0.52
CTSD-213ENST00000637915 DOCK1Q14185 1865 aa18.32■□□□□ 0.52
CTSD-213ENST00000637915 EPHB6O15197 1021 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 CCDC40Q4G0X9 1142 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 NBPF12Q5TAG4 269 aaPredicted RBP18.31■□□□□ 0.52
CTSD-213ENST00000637915 EPM2AIP1Q7L775 607 aaPredicted RBP18.31■□□□□ 0.52
CTSD-213ENST00000637915 ZNF397Q8NF99 534 aaPredicted RBP18.31■□□□□ 0.52
CTSD-213ENST00000637915 ZNHIT6Q9NWK9 470 aaKnown RBP18.31■□□□□ 0.52
CTSD-213ENST00000637915 RPTORQ8N122 1335 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 RSPH10B2B2RC85 870 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 GNA14O95837 355 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 RSPH10BP0C881 870 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 MARSP56192 900 aaKnown RBP18.31■□□□□ 0.52
CTSD-213ENST00000637915 GHRHRQ02643 423 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 ERCC6LQ2NKX8 1250 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 EDRF1Q3B7T1 1238 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 ZNF569Q5MCW4 686 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 TPH2Q8IWU9 490 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 PIGOQ8TEQ8 1089 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 MXRA8Q9BRK3 442 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 CARD6Q9BX69 1037 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 WDR11Q9BZH6 1224 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 TANGO6Q9C0B7 1094 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 SLC38A10Q9HBR0 1119 aa18.31■□□□□ 0.52
CTSD-213ENST00000637915 FAM207AQ9NSI2 230 aaPredicted RBP18.31■□□□□ 0.52
CTSD-213ENST00000637915 CGNQ9P2M7 1197 aaKnown RBP18.31■□□□□ 0.52
CTSD-213ENST00000637915 VCAM1P19320 739 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 MTMR2Q13614 643 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 R3HDM1Q15032 1099 aaKnown RBP18.3■□□□□ 0.52
CTSD-213ENST00000637915 RINT1Q6NUQ1 792 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 B3GNT9Q6UX72 402 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 CPXCR1Q8N123 301 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 UNC45AQ9H3U1 944 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 IPO5O00410 1097 aaKnown RBP18.3■□□□□ 0.52
CTSD-213ENST00000637915 FLOT1O75955 427 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 ITGB5P18084 799 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 HNRNPH3P31942 346 aaKnown RBP18.3■□□□□ 0.52
CTSD-213ENST00000637915 HOXD13P35453 343 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 HERVK_113P62684 666 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 CDK17Q00537 523 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 KRT26Q7Z3Y9 468 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 TRIM59Q8IWR1 403 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 CCDC155Q8N6L0 562 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 MNS1Q8NEH6 495 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 MMRN2Q9H8L6 949 aa18.3■□□□□ 0.52
CTSD-213ENST00000637915 NHEJ1Q9H9Q4 299 aaPredicted RBP18.3■□□□□ 0.52
CTSD-213ENST00000637915 RAVER2Q9HCJ3 691 aaKnown RBP18.3■□□□□ 0.52
CTSD-213ENST00000637915 ZNF541Q9H0D2 1346 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 TBCAO75347 108 aaKnown RBP18.29■□□□□ 0.52
CTSD-213ENST00000637915 TADA3O75528 432 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 MYBP10242 640 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 ALAS1P13196 640 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 MUTP22033 750 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 ADAM9Q13443 819 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 KNOP1Q1ED39 458 aaKnown RBP18.29■□□□□ 0.52
CTSD-213ENST00000637915 MCF2L2Q86YR7 1114 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 CCDC170Q8IYT3 715 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 SLC35F6Q8N357 371 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 IL31RAQ8NI17 732 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 TEKT3Q9BXF9 490 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 BCAS3Q9H6U6 928 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 MYO1AQ9UBC5 1043 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 PPP1R9AQ9ULJ8 1098 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 PLAGL2Q9UPG8 496 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms