RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 AGBL3Q8NEM8 1001 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 TFR2Q9UP52 801 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 MEIS1O00470 390 aa20.45■□□□□ 0.86
CTSD-212ENST00000637815 ZNF263O14978 683 aa20.45■□□□□ 0.86
CTSD-212ENST00000637815 ATP8B1O43520 1251 aa20.45■□□□□ 0.86
CTSD-212ENST00000637815 CC2D1AQ6P1N0 951 aaPredicted RBP20.45■□□□□ 0.86
CTSD-212ENST00000637815 EPM2AIP1Q7L775 607 aaPredicted RBP20.45■□□□□ 0.86
CTSD-212ENST00000637815 NEK11Q8NG66 645 aa20.45■□□□□ 0.86
CTSD-212ENST00000637815 REEP2Q9BRK0 252 aa20.45■□□□□ 0.86
CTSD-212ENST00000637815 TSGA10Q9BZW7 698 aa20.45■□□□□ 0.86
CTSD-212ENST00000637815 TANGO6Q9C0B7 1094 aa20.45■□□□□ 0.86
CTSD-212ENST00000637815 ZSWIM4Q9H7M6 989 aa20.45■□□□□ 0.86
CTSD-212ENST00000637815 LRRC53A6NM62 1247 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 PLEKP08567 350 aaPredicted RBP20.44■□□□□ 0.86
CTSD-212ENST00000637815 PDXDC1Q6P996 788 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 EIF2AK1Q9BQI3 630 aaKnown RBP20.44■□□□□ 0.86
CTSD-212ENST00000637815 WDR18Q9BV38 432 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 TMEM39BQ9GZU3 492 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 SH2D4AQ9H788 454 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 POTEB2H3BUK9 544 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 GCOM1H8Y6P7 765 aaPredicted RBP20.44■□□□□ 0.86
CTSD-212ENST00000637815 EML1O00423 815 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 CFBP00751 764 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 POLR2MP0CAP2 368 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 ERCC3P19447 782 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 CAP2P40123 477 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 SPA17Q15506 151 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 PAPD7Q5XG87 772 aaKnown RBP20.44■□□□□ 0.86
CTSD-212ENST00000637815 RRAGAQ7L523 313 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 FAM160B2Q86V87 743 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 CDAN1Q8IWY9 1227 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 MSANTD4Q8NCY6 345 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 ZBED3Q96IU2 234 aaPredicted RBP20.44■□□□□ 0.86
CTSD-212ENST00000637815 ANKZF1Q9H8Y5 726 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 VEZTQ9HBM0 779 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 PGAP2Q9UHJ9 254 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 FAM184BQ9ULE4 1060 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 ZNRF3Q9ULT6 936 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 TRAF3IP3Q9Y228 551 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 FER1L6Q2WGJ9 1857 aa20.44■□□□□ 0.86
CTSD-212ENST00000637815 CTAGE15A4D2H0 777 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 EYA4O95677 639 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 TFRCP02786 760 aaKnown RBP20.43■□□□□ 0.86
CTSD-212ENST00000637815 CTAGE8P0CG41 777 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 DPEP1P16444 411 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 CASP5P51878 434 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 KIF11P52732 1056 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 CYP27A1Q02318 531 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 MAP3K10Q02779 954 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 CTAGE6Q86UF2 777 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 SFR1Q86XK3 245 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 CTAGE4Q8IX94 777 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 CCDC155Q8N6L0 562 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 TBC1D5Q92609 795 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 CEP72Q9P209 647 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 MRPL11Q9Y3B7 192 aaKnown RBP20.43■□□□□ 0.86
CTSD-212ENST00000637815 CCDC151A5D8V7 595 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 PSMD10O75832 226 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 CYP4A11Q02928 519 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 KIF5AQ12840 1032 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 PPP2R5CQ13362 524 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 ADAM9Q13443 819 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 BRD3Q15059 726 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 CCDC174Q6PII3 467 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 OTOP1Q7RTM1 612 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 SMCR8Q8TEV9 937 aaPredicted RBP20.43■□□□□ 0.86
CTSD-212ENST00000637815 SLC5A5Q92911 643 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 HSD17B14Q9BPX1 270 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 NUCKS1Q9H1E3 243 aaKnown RBP20.43■□□□□ 0.86
CTSD-212ENST00000637815 ZHX3Q9H4I2 956 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 TUFT1Q9NNX1 390 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 FEM1BQ9UK73 627 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.43■□□□□ 0.86
CTSD-212ENST00000637815 MYH11P35749 1972 aa20.43■□□□□ 0.86
CTSD-212ENST00000637815 ANO9A1A5B4 782 aa20.42■□□□□ 0.86
CTSD-212ENST00000637815 CETN3O15182 167 aa20.42■□□□□ 0.86
CTSD-212ENST00000637815 NOL4O94818 638 aa20.42■□□□□ 0.86
CTSD-212ENST00000637815 EIF4A3P38919 411 aaKnown RBP20.42■□□□□ 0.86
CTSD-212ENST00000637815 BMT2Q1RMZ1 405 aa20.42■□□□□ 0.86
CTSD-212ENST00000637815 KRT26Q7Z3Y9 468 aa20.42■□□□□ 0.86
CTSD-212ENST00000637815 SYN2Q92777 582 aaPredicted RBP20.42■□□□□ 0.86
CTSD-212ENST00000637815 BHMT2Q9H2M3 363 aa20.42■□□□□ 0.86
CTSD-212ENST00000637815 EHMT1Q9H9B1 1298 aa20.42■□□□□ 0.86
CTSD-212ENST00000637815 RAB21Q9UL25 225 aa20.42■□□□□ 0.86
CTSD-212ENST00000637815 RABGAP1Q9Y3P9 1069 aa20.42■□□□□ 0.86
CTSD-212ENST00000637815 SSU72P8A0A1W2PR75 194 aa20.41■□□□□ 0.86
CTSD-212ENST00000637815 SEC31AO94979 1220 aaKnown RBP20.41■□□□□ 0.86
CTSD-212ENST00000637815 ATP1A1P05023 1023 aaKnown RBP20.41■□□□□ 0.86
CTSD-212ENST00000637815 HOXD13P35453 343 aa20.41■□□□□ 0.86
CTSD-212ENST00000637815 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
CTSD-212ENST00000637815 KNOP1Q1ED39 458 aaKnown RBP20.41■□□□□ 0.86
CTSD-212ENST00000637815 ASTE1Q2TB18 679 aaPredicted RBP20.41■□□□□ 0.86
CTSD-212ENST00000637815 CACNA2D4Q7Z3S7 1137 aa20.41■□□□□ 0.86
CTSD-212ENST00000637815 NIM1KQ8IY84 436 aa20.41■□□□□ 0.86
CTSD-212ENST00000637815 RUSC1Q9BVN2 902 aa20.41■□□□□ 0.86
CTSD-212ENST00000637815 IFIH1Q9BYX4 1025 aaKnown RBP20.41■□□□□ 0.86
CTSD-212ENST00000637815 DEFB129Q9H1M3 183 aa20.41■□□□□ 0.86
CTSD-212ENST00000637815 ARFGAP3Q9NP61 516 aa20.41■□□□□ 0.86
CTSD-212ENST00000637815 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.41■□□□□ 0.86
CTSD-212ENST00000637815 RGS17Q9UGC6 210 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms