RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 RDM1Q8NG50 284 aa25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 GJA10Q969M2 543 aa25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 USP28Q96RU2 1077 aa25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 TTC12Q9H892 705 aaPredicted RBP25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 CHMP5Q9NZZ3 219 aa25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 GSTTP1A0A1W2PQM5 241 aa25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 MOXD2PA6NHM9 499 aa25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 DDX39AO00148 427 aaKnown RBP25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 SFNP31947 248 aa25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 TXKP42681 527 aa25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 NASPP49321 788 aaPredicted RBP25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 JAK3P52333 1124 aa25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 IRX5P78411 483 aaPredicted RBP25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 KCNA10Q16322 511 aa25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 CLIC4Q9Y696 253 aa25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 WDR81Q562E7 1941 aa25.24■■□□□ 1.63
CHRNA7-231ENST00000637786 WDR64B1ANS9 1081 aa25.23■■□□□ 1.63
CHRNA7-231ENST00000637786 SP4Q02446 784 aa25.23■■□□□ 1.63
CHRNA7-231ENST00000637786 SPIRE1Q08AE8 756 aa25.23■■□□□ 1.63
CHRNA7-231ENST00000637786 PTPAQ15257 358 aa25.23■■□□□ 1.63
CHRNA7-231ENST00000637786 UNC45AQ9H3U1 944 aa25.23■■□□□ 1.63
CHRNA7-231ENST00000637786 CFAP45Q9UL16 551 aa25.23■■□□□ 1.63
CHRNA7-231ENST00000637786 PHF24Q9UPV7 400 aa25.23■■□□□ 1.63
CHRNA7-231ENST00000637786 PCDHA10Q9Y5I2 948 aa25.23■■□□□ 1.63
CHRNA7-231ENST00000637786 BRCA2P51587 3418 aa25.23■■□□□ 1.63
CHRNA7-231ENST00000637786 CABYRO75952 493 aa25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 TCF7P36402 384 aaPredicted RBP25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 MNX1P50219 401 aaPredicted RBP25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 FXR2P51116 673 aaKnown RBP eCLIP25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 ACLYP53396 1101 aa25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 PURAQ00577 322 aaKnown RBP25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 TMEM266Q2M3C6 531 aa25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 MIS18BP1Q6P0N0 1132 aa25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 ABHD15Q6UXT9 468 aa25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 FTOQ9C0B1 505 aaKnown RBP eCLIP25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 DISC1Q9NRI5 854 aa25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 TELO2Q9Y4R8 837 aa25.22■■□□□ 1.63
CHRNA7-231ENST00000637786 EMSYQ7Z589 1322 aa25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 IGKV6D-21A0A0A0MT36 114 aa25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 LGR5O75473 907 aa25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 YEATS4O95619 227 aa25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 MYCNP04198 464 aaPredicted RBP25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 ASGR1P07306 291 aa25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 SUPT20HL2P0C7V6 817 aa25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 SLC39A14Q15043 492 aa25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 DTHD1Q6ZMT9 781 aa25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 MYH9P35579 1960 aaKnown RBP25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 SCN10AQ9Y5Y9 1956 aa25.21■■□□□ 1.63
CHRNA7-231ENST00000637786 TCHHQ07283 1943 aa25.2■■□□□ 1.62
CHRNA7-231ENST00000637786 LGALS2P05162 132 aa25.2■■□□□ 1.62
CHRNA7-231ENST00000637786 PSAPP07602 524 aa25.2■■□□□ 1.62
CHRNA7-231ENST00000637786 PDIA5Q14554 519 aa25.2■■□□□ 1.62
CHRNA7-231ENST00000637786 MIER3Q7Z3K6 550 aa25.2■■□□□ 1.62
CHRNA7-231ENST00000637786 MTG1Q9BT17 334 aaPredicted RBP25.2■■□□□ 1.62
CHRNA7-231ENST00000637786 RAB34Q9BZG1 259 aa25.2■■□□□ 1.62
CHRNA7-231ENST00000637786 SAMM50Q9Y512 469 aa25.2■■□□□ 1.62
CHRNA7-231ENST00000637786 CHMP2AO43633 222 aa25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 F2P00734 622 aa25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 MYL3P08590 195 aa25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 EN2P19622 333 aaPredicted RBP25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 TECP42680 631 aa25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 DNM1Q05193 864 aaKnown RBP25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 LINC00301Q8NCQ3 95 aa25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 AFAP1L1Q8TED9 768 aa25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 FERMT2Q96AC1 680 aa25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 C16orf70Q9BSU1 422 aa25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 SMARCAD1Q9H4L7 1026 aa25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 TFIP11Q9UBB9 837 aaKnown RBP25.19■■□□□ 1.62
CHRNA7-231ENST00000637786 CCDC85CA6NKD9 419 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 EML1O00423 815 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 COL6A1P12109 1028 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 KRT85P78386 507 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 CEBPZQ03701 1054 aaKnown RBP25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 EPHA7Q15375 998 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 FOXD4L6Q3SYB3 417 aaPredicted RBP25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 CXCL17Q6UXB2 119 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 FOXD4L3Q6VB84 417 aaPredicted RBP25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 PLPPR4Q7Z2D5 763 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 IGSF22Q8N9C0 903 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 GLT1D1Q96MS3 346 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 PCYT2Q99447 389 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 KATNAL1Q9BW62 490 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 AZI2Q9H6S1 392 aa25.18■■□□□ 1.62
CHRNA7-231ENST00000637786 A0A1W2PQ45 241 aaPredicted RBP25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 A0A1W2PQY0 241 aa25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 SLC26A2P50443 739 aa25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 STK38Q15208 465 aa25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 IL17AQ16552 155 aa25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 FAM160B1Q5W0V3 765 aa25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 NCAPH2Q6IBW4 605 aa25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 NEK9Q8TD19 979 aa25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 KAT2BQ92831 832 aa25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 ZNF215Q9UL58 517 aaPredicted RBP25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 STK24Q9Y6E0 443 aa25.17■■□□□ 1.62
CHRNA7-231ENST00000637786 POTEMA6NI47 508 aa25.16■■□□□ 1.62
CHRNA7-231ENST00000637786 H3BRB1 525 aa25.16■■□□□ 1.62
CHRNA7-231ENST00000637786 BACH1O14867 736 aa25.16■■□□□ 1.62
CHRNA7-231ENST00000637786 PPP6R2O75170 966 aa25.16■■□□□ 1.62
CHRNA7-231ENST00000637786 ZNF286BP0CG31 522 aa25.16■■□□□ 1.62
CHRNA7-231ENST00000637786 STAT5BP51692 787 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms